Serratia plymuthica S13: M621_17240
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Entry
M621_17240 CDS
T02716
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
sry
Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sry03400
]
M621_17240
DNA repair and recombination proteins [BR:
sry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
M621_17240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
AAA_16
zf-tcix
Zn_ribbon_3
SLFN-g3_helicase
AAA_22
Zn_Ribbon_1
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGP45276
UniProt:
S4YL78
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All DBs
Position
3621323..3623080
Genome browser
AA seq
585 aa
AA seq
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MAFTLRPYQLEAVEATIKHFRQHSQPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKDSAGKVVFGSVQSVARNLSLFDGAFSLLIIDECH
RISDDDDSQYQQIIQHLQKSNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDAGSLFRD
CIYELPLRYMIKHGYLVPPERLDMPIVQYDFSRLEARSNGLFSEVDLNRELKQQNRITPH
IISQIVEYAETRKGVMIFASTVEHAREIHGLLPAGEAALVSAETPAAERDALIEAFKQQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHSDSQPVQVFCPGCGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKEALKLKDALVLRCGGME
LQSGRDEKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFSWQTA
ADVLAQQTLLRHPDFVVARKRGQFWQVREKVFDYQGRFRRANELY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactctacgcccctaccaactggaagcggtcgaagccaccatcaaacatttc
cgccagcactctcaaccggcgctgattgtgctgccgaccggtgcaggcaaaagtctggtg
atcgccgaactggcgaagcgcgcacgcggccgggtattggtgctggcccacgtgaaagag
ctggtggcgcaaaaccacgccaaatactgcgcctacggtctggaggcggatatctttgcc
gccgggctgcagcaaaaagacagcgccggcaaagtggtgttcggcagcgtacagtccgtg
gcgcgtaatctgtcgttgttcgacggcgcattttccctgctgattatcgacgagtgccac
cgcatcagcgacgacgatgacagccagtaccagcaaattattcagcatctgcaaaaatcc
aacccgcagttgcggctgttgggactgactgccacgccttaccggctgggtaaaggctgg
atttatcagtatcactaccacggctttacccgcggcgatgccggcagcctgtttcgcgac
tgcatttatgaactgccgctgcgctacatgatcaagcacggttatctggtgccgccggaa
cggctcgacatgccgattgtgcagtacgatttcagccgcctggaggccagaagcaacggc
ctgttcagtgaggtggacctcaaccgcgagctgaaacagcaaaatcgtatcacgccgcac
atcatcagccagatcgtcgaatatgccgaaacgcgcaaaggggtgatgattttcgcctcc
accgttgagcatgctcgtgagatccacggcctgctgccggccggtgaggccgcgctggtc
agcgccgaaacgccggccgccgaacgggatgcgttgattgaggcgttcaaacaacaacgg
ctgcgctatctggtcaacgtggcggtgttgaccaccggctttgacgcgccgcatgtcgat
ctgatcgccattttgcgccccaccgaatccgtcagcctttatcagcaaatcgtcggccgc
gggctgcggctggctcccggcaaagaggattgcctgatcctcgactacgccggcaacccg
catgacctgtttacgcctgaggtgggcgtcagcaaaccgcacagcgacagccagccggta
caggtattctgtcccggctgcggcttcgccaacctgttctggggaaaatgcaccgaaaat
ggcgacatcatcgagcattacggccgccgctgccagggctggctggaagacgatgatggc
catcgcgaacagtgcgactaccgctttcgtttcaagagttgcccgcactgtggcgcagaa
aacgacattgctgcgcgccgctgccaccagtgccaggaagtgctggtcgatcccgacgat
atgctgaaagaagcgctgaaactgaaggacgcattggttctgcgctgcggcggtatggag
ttgcaaagcggacgcgatgaaaaaggcgagtggctgaaggccacctattacgatgaagac
ggcaccagcaccagcgagcgtttccgcctgcaaacgccggcgcagcgcaaagccttcgag
atgctgtttctgcgcccgcatcaacgcgccccgggggtaccgttcagttggcaaaccgca
gccgacgtgctggcccaacagactctgttgcgtcatccggattttgtcgtggcgcgcaaa
cgtgggcaattctggcaggtacgggaaaaagtgttcgattatcaaggccgcttccgccgg
gccaacgagctgtattga
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