Serratia plymuthica S13: M621_21140
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Entry
M621_21140 CDS
T02716
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sry
Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sry03016
]
M621_21140
Enzymes [BR:
sry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
M621_21140
Transfer RNA biogenesis [BR:
sry03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
M621_21140
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AGP45927
UniProt:
S4YKL5
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All DBs
Position
4463531..4464073
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AA seq
180 aa
AA seq
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MSSSRRLFFALTLPDALQQQVIRWRAEAFTPEAGRPVAAANLHLTLAFLGDVSAQKETAL
KNLAGRIIQPGFSMILDDLGHWPRPGVVWLGTRRAPRGALQLAELLRSQAARSGCYQSPM
PFHPHITLLRSATQPVAVPPATPGWTFSADSFTLYQSVFENGRTRYHPLEQWPLAHQDTP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcgcgccgcctgtttttcgccctgaccttacctgatgcactgcagcaacag
gtgattcgctggcgcgccgaagctttcacgcccgaagccggtcggccagtcgccgcggcc
aacctgcatctgacgctagcgtttctcggtgatgtcagcgcgcaaaaggaaaccgcgctg
aaaaatctggccggccgcattatccaacccggcttcagcatgatactggacgatcttggc
cactggccgcgccctggcgtggtatggcttggcacccgccgcgcaccgcgaggggcgttg
caactggcggagctgttgcgatcgcaggcggcccgcagcggctgctaccaaagcccgatg
ccgtttcatccgcacatcaccctgctgcgctctgcaacgcaaccggtagccgtgccgccc
gcaacgccgggctggaccttcagcgccgactccttcaccctgtaccagtcggtatttgag
aacggtcgcacgcgttatcacccgctggaacaatggcctttagcccatcaggatacccca
tga
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