Serratia plymuthica S13: M621_24670
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Entry
M621_24670 CDS
T02716
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
sry
Serratia plymuthica S13
Pathway
sry02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M621_24670
Enzymes [BR:
sry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
M621_24670
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_10
GGDEF_2
RIP
Motif
Other DBs
NCBI-ProteinID:
AGP46512
UniProt:
S4YMK5
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All DBs
Position
5251449..5253443
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AA seq
664 aa
AA seq
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MFADQGPMLLNAHFGTGSPYWRLAFDSNALELSAVKGKAHMAVALSAIQAAKIRRLSGIT
ASLDISISLVGEPIHLHLVGRRINKLEWAGTASAFSDTKSVARDLVHGLFFAEQVVSEAN
SVIVIVDQHGRIQRFNRLSEEYTGLHEHDVIGKNVFQLFMSPEEAAASRRNIAGFFRNGS
SYEVERWVKTVKGERLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTDI
ITGLPNRNAIQDKIIQAIAERGDSNVGLVYLDLDNFKKVNDAYGHMFGDRLLVEVSLAVL
GCLEPDQVLARLGGDEFLVLAQQADREVLQQLAQRIIDRLKTPFRIGLIEVYTGCSIGIA
LCPEHGNDLDGLIRSADTAMYVAKERGKRTFTVFSPEMNKRVAEYMWLDTNLRKGLEQNQ
LVVYYQPKIDALSGMVHSVEALVRWDSPERGLIPPLQFISYAEESGLIGPLGRWVLQTAA
KQAAQWQQQGLALRVAVNLSARQLVDDSIVEDLINVLQHNKLTPCLLDFELTESSLIEDE
RRARAVITRLRELGAQVHLDDFGTGYSSLAQLARIPLDAIKLDKSFVRGVNFNPVSQSLV
RAIVAAAEALKFRVIAEGVETESENRFLDEVGVDEKQGFLFARPMLPEQLEHWLRSYCPS
PPSA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagaccaaggccctatgctcctgaacgcccactttggcaccggcagcccctac
tggcggctggcattcgacagcaatgccctggagctgtccgcagtcaaaggcaaagcccat
atggccgtggcgctcagcgccatacaggcggcaaaaatacggcgtctgagcggcattacc
gccagcctggatatctctatttcgctggtcggcgagccgatacatttgcatctggtgggc
cgccggatcaacaaactggaatgggccggcaccgcctccgctttcagcgacaccaagtcg
gtcgcccgtgacctggtgcatgggcttttctttgccgagcaggtggtatccgaagccaat
tcggtgatcgtgattgtcgatcagcatggccgcatccaacgcttcaaccgtttgagcgaa
gaatacaccggcctgcatgaacatgatgtcattggcaaaaacgtctttcagctgtttatg
agcccggaagaagcggcggcctcgcggcgaaatatcgccggttttttccgtaatggttcg
tcctacgaggtggaacgttgggtcaaaacggtaaaaggcgagcggctgtttttgttccgc
aacaaattcgtccacagcggtagcgggaaaaacgaagtcttcctgatttgttccggtacg
gacatcaccgaagaacgccgcgcccaggaacgcctgcgggtgctggccaataccgatatc
atcaccggcctgcccaaccgcaacgccattcaggacaaaatcatccaggctatcgcggag
cgcggtgacagcaacgttgggctggtgtacctcgatctcgataatttcaaaaaggtgaac
gacgcctacgggcatatgttcggcgaccgtttgctggttgaagtatcgctggcggtgctc
ggctgtctggagcccgatcaggttctggcccgtcttgggggcgatgaattcctggtgctg
gcccaacaggccgaccgcgaggtgctgcaacagctggcccagcgtattatcgatcgattg
aaaacgcccttccgcatcggccttatcgaagtctataccggttgttcgattggcatcgcg
ctgtgcccggaacacggtaacgatctcgacggcctgatccgcagcgccgacaccgccatg
tacgtcgccaaagagcgcggcaaacgcacctttaccgtattctcgccggaaatgaacaaa
cgcgtcgccgaatatatgtggctggacaccaacctgcgcaagggtctggagcagaatcaa
ctggtggtttattaccaaccgaaaatcgatgcgctcagcggcatggtgcacagcgtggaa
gccctggtacgttgggactcgcccgaacgcggtctgatcccgccgttacagtttatctct
tacgctgaagaatccgggctgataggcccgctcggccgatgggtgctgcagactgcggcc
aaacaggccgcccagtggcaacagcaagggctggcgctgcgggtcgccgtaaatctttcc
gcacggcagttggtcgatgattccatcgtggaagatcttatcaacgtgttgcagcacaac
aagttgacgccgtgcctgctggacttcgaactgacggaaagcagcctgattgaggatgag
agacgcgcacgcgcggtcatcacccggctgcgagaactgggcgcgcaagttcatctcgat
gattttggcaccgggtactcctcgctggcgcagctggcgcgtatcccgctggatgccatt
aagttggataaaagctttgtgcgcggcgtgaatttcaatccggtttcgcaatcgctggtg
cgcgccatcgtcgcggcggccgaggcgctgaaattccgggtgatcgccgaaggcgttgag
acagaaagcgagaacaggttcctggatgaggttggcgtggacgagaaacaggggttcctg
tttgcgcggccaatgctcccggaacagctggaacattggctgcggtcttattgcccgtca
cccccctcagcgtga
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