Serratia rubidaea: AXX16_0128
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Entry
AXX16_0128 CDS
T04417
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srz03016
]
AXX16_0128
Enzymes [BR:
srz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AXX16_0128
Transfer RNA biogenesis [BR:
srz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXX16_0128
Prokaryotic type
AXX16_0128
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AML55890
UniProt:
A0A447QMV3
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All DBs
Position
complement(140391..141335)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRCYNANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVNITQQQLDAALETFRGDIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELKFIRWEGDELELEVHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVAKYPIERMVTLEQLNALLEQAQAEGIAPGELLDPL
LMPMDSPCADFPEVNLLPAVAGYVKQGQPVQAAGAPDSGMVRITEGDAHKFIGVGEIADD
GRVAPKRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgcgatatccacggcgtgctgttgctggacaagccg
cagggcctgtcctccaacgacgcgctgcaaaaagtaaagcgttgctataacgccaaccgt
gcgggccataccggcgcgctcgacccgctggcgaccggcatgctgccgatctgcctgggg
gaagccaccaagttttcccagttcctgctggattccgacaagcgctatcgggtgattgcc
cgcttggggcagcgtaccgacacctcggacgcggacggccagatcgtgcaggaacgcccg
gtgaatatcactcaacagcagcttgatgcagcgctggagaccttccgcggcgatatccag
caggtgccgtcgatgtactccgcgctgaagtatcagggtaaaaaactgtacgaatatgcg
cgtcagggcattgaagtgccgcgcgaagcgcgcagcattacggtctacgagctgaagttt
atccgctgggaaggcgatgagctggagctggaggttcactgctccaaaggcacctatatc
cgcaccattaccgacgacctgggcgaactgctgggctgcggcgcgcacgtgatttatctg
cgccgtctgcaggtggcgaagtacccgatcgaacggatggtgacgctggagcagctgaac
gcgttgctggaacaggcgcaggccgaaggcatagcgccgggcgagctgctcgatccgctg
ctgatgccgatggacagcccgtgcgccgacttcccggaagtgaacctgctgccggcggtg
gccggctacgtcaagcagggccagccggtgcaggccgccggcgcgccggactccggcatg
gtgcgcatcaccgaaggcgacgcgcataagtttatcggcgtcggcgagattgccgacgac
ggtcgtgtggcgcctaagcgtctggttgtcgagcatttcgactga
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