Serratia rubidaea: AXX16_0203
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Entry
AXX16_0203 CDS
T04417
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
srz
Serratia rubidaea
Pathway
srz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AXX16_0203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srz03019
]
AXX16_0203
03009 Ribosome biogenesis [BR:
srz03009
]
AXX16_0203
Messenger RNA biogenesis [BR:
srz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AXX16_0203
Ribosome biogenesis [BR:
srz03009
]
Eukaryotic type
Pre-60S particles
RNases
AXX16_0203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AML55962
UniProt:
A0A126VCG1
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All DBs
Position
complement(212462..213007)
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AA seq
181 aa
AA seq
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MTANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDD
WNVRTHTGSGLVERVKASSIDDRAAELATIAFLEQWVPAGKSPICGNSVGQDRRFLFRYM
PLLEAYFHYRYLDVSTLKELARRWKPEILAGFKKQGTHQALDDIRESVAELAYYREHFIQ
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaacgaaaataacctgatttggatcgatctggagatgaccggtctggatccc
gagcgcgaccgtattatcgagatcgccacgctggtgacggacgccaatctgaacattctg
gcggaagggccggtgatcgccgttcatcagtcagatgaacagctggcgttaatggacgac
tggaacgtgcgcacccacaccggcagcgggctggtggagcgggtgaaggccagcagcatt
gacgaccgcgcggcggagctggcgaccatcgcgtttcttgaacagtgggtgccggcgggc
aaatcgccgatctgcggcaacagcgtgggccaggaccggcgttttctgttccgctatatg
ccgctgctggaagcctacttccactaccgctatctggacgtcagcacgctgaaggagctg
gcgcgccgctggaagccggaaattctggccggttttaaaaagcagggcacccatcaggcg
ctggacgatatccgcgaatcggtggcggaactggcctattaccgtgagcattttattcag
ctgtaa
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