Serratia rubidaea: AXX16_0209
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Entry
AXX16_0209 CDS
T04417
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
srz
Serratia rubidaea
Pathway
srz00020
Citrate cycle (TCA cycle)
srz00190
Oxidative phosphorylation
srz00620
Pyruvate metabolism
srz00650
Butanoate metabolism
srz00720
Other carbon fixation pathways
srz01100
Metabolic pathways
srz01110
Biosynthesis of secondary metabolites
srz01120
Microbial metabolism in diverse environments
srz01200
Carbon metabolism
srz02020
Two-component system
Module
srz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srz_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AXX16_0209
00620 Pyruvate metabolism
AXX16_0209
00650 Butanoate metabolism
AXX16_0209
09102 Energy metabolism
00190 Oxidative phosphorylation
AXX16_0209
00720 Other carbon fixation pathways
AXX16_0209
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AXX16_0209
Enzymes [BR:
srz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AXX16_0209
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
Lycopene_cycl
GIDA
FAD_oxidored
FabD_helical_ins
DAO
Motif
Other DBs
NCBI-ProteinID:
AML55968
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All DBs
Position
220012..221808
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AA seq
598 aa
AA seq
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MQTFNADLAIIGAGGAGLRAAIAAAEANPALKIALVSKVYPMRSHTVAAEGGSAAVTQAH
DAYDYHFNDTVAGGDWLCEQDVVDHFVHQCPREMTQLEQWGCPWSRREDGSVNVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDDGQARGLVAINMMEGS
RVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGIAFRHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR
AGRTIATPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG
GIETDQNCETRIKGLYAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEHAAQRAQESAP
ANGSALEAQSRDVEQRLHDLLAQEGDESWSAIRDEMGLSMEEGCGIYRTPELMQKTIDKL
AELKERVKRVRIADRSNVFNTDLLYTIELQHGLNVAECMAHSAFNRKESRGAHQRLDDGC
TERDDVNFLKHTLAFHSADGAPRLEYSDVKITKLPPAKRVYGAEADAQEKKEKEQANG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacctttaacgccgatctcgccattattggcgccgggggcgcgggtttacgtgcg
gcgatagccgccgcggaagccaaccccgccttaaaaattgccctggtgtcaaaagtctac
cccatgcgcagccacacggtggccgccgagggcggttccgccgccgtcacccaggcgcac
gacgcctacgattatcacttcaacgataccgtcgccggcggcgactggctgtgcgaacag
gacgtggtggatcactttgtgcaccaatgcccgcgggaaatgacccagctggagcaatgg
ggctgtccgtggagccgcagggaagatggttcggtcaacgtgcgccgttttggcggcatg
aagatcgaacgcacctggttcgcggccgataaaaccggcttccatatgctgcacaccctg
ttccagacctcgctgaaatacccgcaaatccagcgctttgatgagcatttcgtcctcgat
attctggtcgatgacggccaggcgcgcggcctggtcgccatcaatatgatggaaggcagc
cgggtgcagatccgcgccaacgcggtggtgatggccaccggcggcgccggccgcgtttac
cgttacaacaccaacggcggcatcgtgaccggcgacggcatgggcatcgccttccgccac
ggcgtgccgctgcgcgatatggagtttgtgcagtatcaccccaccggcctgcccggctcc
ggcatcctgatgaccgaaggctgccgcggcgaaggcggcattctggtgaacaaagacggc
tatcgctatctgcaggattacggcatggggccggagacgccgctcggcgagccgaagaac
aaatatatggagctggggccgcgcgacaaagtctcccaggccttctggcacgaatggcgc
gccggccgcaccatcgctacgccgcgcggcgacgtggtgtatctggatctgcgccacctc
ggcgagaagaagctgctcgaacgtctgccgtttatctgcgaactggccaaggcctacgtc
ggcgtcgacccggtgaaagaaccgattccggtgcgcccgaccgcgcactacaccatgggc
ggcattgaaaccgaccagaattgcgaaacccgcatcaagggcctgtatgcggtgggcgaa
tgctcatccgtcggcctgcacggcgccaaccggctcggctccaactcgctggcggaactg
gtggtgtttggccgtgtggcgggcgaacacgccgcgcagcgcgcgcaggagagcgcgccg
gccaacggcagcgcgctggaggcgcaaagccgcgacgtcgagcagcgcctccacgacctg
ctggcacaggaaggcgacgaaagctggtcggcgatccgcgacgaaatgggcctgtcgatg
gaagaaggctgcggcatctaccggacgccggagctgatgcagaaaaccatcgacaagctg
gcggagctgaaggagcgcgtgaaacgcgtcaggattgccgaccgctccaacgtattcaac
accgacctgctgtacaccatcgaactgcagcacggtctgaacgtggcggaatgcatggcg
cactccgcctttaaccgcaaagagtcgcgcggcgcccaccagcggctggacgacggctgc
accgagcgtgacgacgtcaacttccttaagcatacgctggcgttccacagcgccgacggc
gcgccgcgcctggagtacagcgatgtgaaaattaccaagctgccgccggccaagcgcgtc
tatggcgccgaggccgatgcgcaggagaaaaaggagaaggagcaggcgaatggctga
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