Serratia rubidaea: AXX16_0256
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Entry
AXX16_0256 CDS
T04417
Name
(GenBank) Hydroxymethylpyrimidine phosphate synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
srz
Serratia rubidaea
Pathway
srz00730
Thiamine metabolism
srz01100
Metabolic pathways
srz01240
Biosynthesis of cofactors
Module
srz_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AXX16_0256
Enzymes [BR:
srz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AXX16_0256
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AML56010
UniProt:
A0A4U9H8Q4
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Position
267338..269272
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AA seq
644 aa
AA seq
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MSNNNQRPRKVQREAAQQFIDNLQGVAFPSSRRIYLQGSRPDLRVPMREIQLSPTLIGGS
KDEPQYEPNEAVPVYDTAGPYGDPASQLDVHRGLDKLRAGWIAERDDTETLAHVSSGFTQ
QRLADEGLDHLRFEHLPQPRKAQAGKCVTQLHYARAGIVTPEMEFIAIRENMGRERIRSE
VLRQQHPGQSWGANLPENITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNAN
IGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQA
LEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIM
AKWCLSHHQENFLYEHFREICEICAAYDVSLSLGDGLRPGSVQDANDEAQFSELHTLGEL
TKIAWEYDVQVMIEGPGHVPMHMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSG
IGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNA
MSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKIAHFCSMCGPKFCSMKISQEVRD
YAAAQEAAKPIEVLSGMEKMSAEFRSRGSELYHSATALQEDNNG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataacaaccagcgtccccgtaaagtacagcgtgaagcagcgcagcagtttatc
gataaccttcagggcgtcgccttccccagctcccgccgcatctatctgcaagggtcgcgt
cccgacctgcgggtaccgatgcgcgagatccagctcagcccgaccctgatcggcggcagc
aaagacgaaccgcaatacgaaccgaacgaagcggtgccggtctacgacaccgccggccct
tacggcgacccggcatctcagttggacgtgcaccgcggcctggacaagctgcgcgccggc
tggatcgcggaacgcgacgataccgaaacgctcgcccacgtcagctccggctttacccag
cagcgcctggcggatgaaggcctggaccacctgcgcttcgagcatctgccgcagccgcgc
aaagcgcaggcgggcaaatgcgtcacccagctgcactatgcgcgcgccggcatcgtcacg
ccggagatggaatttatcgccatccgcgaaaatatgggccgtgagcgcatccgcagcgaa
gtgctgcgtcagcagcatcccggccagagctggggcgccaacctgccggaaaacatcacg
ccggagtttgtccggcaggaagtggccgccggccgcgccattatcccggccaacatcaac
cacccggaatccgaaccgatgattatcggccgcaacttcctggtgaaggtcaacgccaat
atcggcaactctgcggtcacctcctccatcgaggaagaggtggaaaaactggtgtggtcc
acccgctggggcgcggataccgtgatggacctctccaccggccgctatatccacgaaacc
cgcgaatggatcctgcgcaacagcccggtgccgatcggcaccgtcccgatctatcaggcg
ctggaaaaagttaacggcgtggcggaaaacctcacctgggagatgttccgcgacacgctg
ctggaacaggcggagcaaggggtcgactacttcaccatccacgccggcgtgctgctgcgc
tacgtgccgatgaccgccaaacgtctgaccggcatcgtctcgcgcggcggttcgatcatg
gccaaatggtgcctgtcgcaccatcaggaaaacttcctgtatgaacacttccgtgaaatc
tgcgaaatctgcgccgcttacgacgtatcgctgtcgctgggtgacggcctgcgtcccggc
tcggtacaggatgccaacgatgaagcgcagttctccgagctgcatacgctgggcgagctg
accaaaatcgcctgggaatacgacgtgcaggtgatgatcgaaggcccgggccacgtgccg
atgcatatgatccgccgcaatatgaccgaagagctggagcactgccacgaagcgccgttc
tatacgctggggccgttgaccaccgatatcgcgccgggctatgaccacttcacctccggc
atcggcgccgcgatgatcggctggttcggctgcgccatgctgtgctacgtcacgccgaaa
gagcacctggggctgccgaacaaagaggacgtcaagcaggggctgatcacctataagatc
gccgcgcacgccgcagacctggccaaaggccatcccggcgcgcagatccgcgataacgcc
atgtccaaggcgcgctttgagttccgctgggaagaccagttcaatctggcgctggatccc
gccaccgcccgcgcctatcacgatgagacgctgccgcaggagtccggcaaaatcgcccac
ttctgctccatgtgcgggccgaaattctgttcgatgaaaatttcacaggaagttcgcgac
tacgccgccgcgcaggaagccgccaagccgattgaggtgctgtccggtatggaaaaaatg
tccgccgagttccgctcacgcggcagcgagctctatcacagcgccaccgcgctgcaggag
gacaacaatggctga
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