KEGG   Serratia rubidaea: AXX16_0477
Entry
AXX16_0477        CDS       T04417                                 
Name
(GenBank) VgrG protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
srz  Serratia rubidaea
Pathway
srz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:srz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AXX16_0477
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:srz02044]
    AXX16_0477
Secretion system [BR:srz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AXX16_0477
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C Gp44-like_2nd
Other DBs
NCBI-ProteinID: AML56216
LinkDB
Position
complement(515012..517321)
AA seq 769 aa
MFDRITVTTPAGAGALKFWKLSGVEQVSHSFELQVMLLSTDARLDRRAMLGQPITLTIPT
QGLLSAPRYLNGKVTSVNVHSADINGARYAVYTLTMESDLWPLKRDRNQRIFQNQRVPDI
VRTVLGEYGVQVEEQLSGSYRSWEYCVQYQESSYDFISRLMELEGIYFFFRHEADKHTLV
LHDAPQQHQPFSGYEAIPYHATPSGGSTGEEGIGLWAISERVTPGIYSIDDYDFRKPNAW
LFQARQNPSSPQPGQIDYYDWPGHFVEHGDGEFYARVRQEEWQAEHQRISATATALGIVP
GCTFTLLNPPFASDSGEYLVLSASYDLEENSYASGGDEAVHRIDMTVIPADTPYRSPQRT
PWPRTHGPQTARVVGPQGESIWTDKYGRIKVKFHWDRQAKGDETSSGWVRVSSAWAGQGF
GGVQIPRVGDEVVIDFINGDPDRPIVTGRVYNEASMPPWALPAGATMMGFMTRSKDGHSD
NSSHLFFEDKAGSEMVQLHAEKDMNISVENDKTVTIDGNRTTTIQKKQQDEVFGDARFTY
HGTRTTTVTKKETKTFEDGEKVTISNGRNSEITSGGEQLKITGERRVETVGTEEQIVSKK
VTRRYNEGMDFYLEGKRYDQITGKRHVIVTDDVTDDYQGNLNQTITKNVDTKIIGNWKQD
AKEGMTLTSDQMITIDSKVKVSIKTPAALEYKDHKETVSMFSFDFTAAKVVTEGYSTTVT
VGGKLGLATMKFDKTGFDLSTKEGRVEFGQAMVQVGQIMSQFNGLTIMG
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgtttgaccgtattacggtgacaacgccggcgggcgccggtgcgttgaagttctggaag
ctcagcggggtggaacaggtttcacactcgttcgagctgcaggtgatgctgctcagcacc
gacgcccggctggaccgccgggcgatgctgggccagccgatcaccctgaccatcccgacg
caggggctgctgtccgcgccgcgctatctcaacggtaaggtcacctcggtcaacgtacac
agcgccgacattaacggtgcgcgctacgccgtttacactctgacgatggaatccgacctg
tggccgctgaagcgggatcgcaaccagcgcatcttccagaaccagcgcgtgccggatatc
gtcagaacggtgctcggggagtacggcgtgcaggtggaggagcagctctccggcagctac
cgcagctgggagtactgcgtgcagtatcaggaaagcagctacgactttatctcccggctg
atggagctggaggggatttacttcttcttccgccacgaggcggataaacacacgctggtg
ctgcacgatgcgccgcagcagcaccagccgttcagcggctatgaggcgattccctaccac
gccacgccgtccggcggcagcaccggcgaggaggggatcggcctgtgggcgatctccgag
cgggtgacgccggggatctacagcatcgacgactacgatttccgcaagcccaacgcctgg
ctgtttcaggcgcggcagaaccccagctcgccgcagccggggcagattgactactacgac
tggccgggacactttgttgagcacggcgacggcgaattctacgcccgcgtgcggcaggag
gagtggcaggcggagcaccagcgcatcagcgccaccgccaccgcgctgggcatcgtgccg
ggctgcacctttacgctgcttaacccgccgttcgccagcgacagcggcgagtatctggtg
ctgagcgctagctacgatctggaggagaacagctacgccagcggcggcgacgaggcggtg
caccgcatcgatatgacggtgatccccgccgatacgccgtaccgctcgccgcagcgcacg
ccgtggccgcgcacccacggcccgcagaccgcgcgggtggtggggccgcagggcgaatcg
atctggaccgacaaatatggccgcatcaaggtgaagttccactgggaccggcaggccaag
ggcgatgaaaccagctccggctgggtgcgagtctccagcgcctgggccggccagggcttt
ggcggcgtgcagatcccgcgcgtcggcgacgaggtggtgatcgactttatcaacggcgat
ccggaccggccgatagtcaccggccgggtgtataacgaggccagcatgccgccgtgggcg
ctgcccgccggcgccaccatgatgggctttatgacccgctccaaggacggccacagcgac
aactccagccatctgttctttgaggacaaggccggctcggagatggtgcagctgcacgcc
gaaaaggatatgaatatttcggtggagaacgataaaacggtgaccattgacggcaaccgc
accaccaccattcagaaaaagcagcaggacgaggtgttcggcgacgccaggttcacttac
cacggcacgcgcaccaccacggtgaccaagaaagagaccaagacgtttgaagacggcgag
aaggtcaccatcagcaacggccgcaactcggagatcaccagcggcggtgaacagctgaag
atcaccggcgaacgcagggtagagacggtgggtaccgaagagcagatcgtgtcgaaaaag
gtgacccggcgctataacgaaggcatggatttttatctggaaggcaaacgctatgaccaa
atcaccgggaaacgccacgttatcgtgaccgatgacgtgaccgacgactaccagggcaac
ctgaatcagaccatcaccaaaaatgtcgataccaaaattatcggcaactggaagcaggat
gccaaagagggcatgacgctgacctcggatcagatgattaccatcgacagtaaggtgaag
gtcagcatcaaaacgccggcggcgcttgagtacaaggaccataaagagaccgtgtcgatg
ttctcgttcgatttcacggcggcgaaggtggtgacggagggctattccaccaccgttacc
gtcggcggtaaactcggtctggcaacgatgaaattcgacaagaccggttttgacctctcg
accaaagaggggcgagtggagtttggtcaggcaatggtgcaggtcgggcagattatgtcg
cagtttaacggcctgacgattatgggctga

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