Serratia rubidaea: AXX16_0487
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Entry
AXX16_0487 CDS
T04417
Name
(GenBank) Formate dehydrogenase O alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
srz
Serratia rubidaea
Pathway
srz00630
Glyoxylate and dicarboxylate metabolism
srz00680
Methane metabolism
srz01100
Metabolic pathways
srz01120
Microbial metabolism in diverse environments
srz01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AXX16_0487
09102 Energy metabolism
00680 Methane metabolism
AXX16_0487
Enzymes [BR:
srz01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
AXX16_0487
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
AML56226
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All DBs
Position
complement(525900..528947)
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AA seq
1015 aa
AA seq
DB search
MQVSRRQFFKICAGGMAGTTVAALGFTPEAALAETRQYKLLRARETRNNCTYCSVGCGLL
MYSLGDGAKNAKESIFHIEGDPDHPVSRGALCPKGAGLVDFIHSEGRLQYPEYRAPGSDK
WQRLSWDDAFTRIAKLMKEDRDANFVATNEQGATVNRWLSTGMLCASGASNETGYLTQKF
TRALGMLAVDNQARVRHGPTVASLAPTFGRGAMTNHWVDIKNANLIVVMGGNAAEAHPVG
FRWAMEAKIHNKAKLIVIDPRFTRTASVADFYTPIRSGTDIAFLSGVLLYLITNNKINRE
YVEAYTNASLLVREDFAFEDGLFSGYDADNHKYDKTTWNYQLDENGYAKRDVTLQDPRCV
WNMLKEHVSRYTPDVVENICGTPKADFLQVCEYIAETSAHDRTASFLYALGWTQHSVGAQ
NIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYLTLPSEQQTDLNG
YLNANTPKALLPGQVNYWSNYPKFFVSLMKSFYGDKAQKENDWGFDWLPKWDKGYDVLQY
FEMMAQGKVNGYFCQGFNPVASFPNKNKVVASLSKLKFLVTIDPLNTETANFWQNHGEFN
DVDPSQIQTEVFRLPSTCFAEENGSIVNSARWLQWHWKGADGPGEAMNDGEILSGIFSRL
REMYARDGGATPEPVLNMTWDYLTPENPSPEEVAQESNGKALADILDADGKVLVKKGQQL
STFAHLRDDGTTASGCWIFAGSWTPEGNQMARRDNADPSGLGNTLDWAWAWPLNRRILYN
RASADPSGKPWDPKRQMLEWDGAKWTGMDVPDYSTAAPDSDVGPFIMQPEGMGRLFAIDK
MAEGPFPEHYEPFETPLGTNPLHPKVVSNPAARVFKDDLATMGKSDKFPYVGTTYRLTEH
FHYWTKHARLNAIAQPEQFVEIGEKLAQKKGIKQGDTVKVSSNRGYIKAKAVVTKRIRTL
QVNGQEVDTIGIPIHWGYTGVAKKGFLANTLTPFVGDANTQTPEFKAFLVNVEKV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcagcagaaggcagttctttaagatctgcgctggcggtatggcagggacgacg
gtggccgcgctggggttcaccccggaagcggcgttagcggaaacccggcagtacaaactg
ctgcgcgcccgtgaaacccgtaacaactgtacatactgttccgtcggctgtgggttgttg
atgtacagccttggcgacggcgccaagaacgcaaaagaaagcattttccatatcgaaggg
gatccggatcatccggtcagccgcggcgcgctttgcccgaaaggcgcaggcctggtggat
ttcatccacagcgaaggccgtctgcagtaccctgaataccgcgcgccaggctctgataaa
tggcagcgcctcagctgggacgacgcctttacccgcatcgccaagctgatgaaagaggac
cgcgacgccaacttcgtcgccaccaacgaacagggcgccaccgttaaccgctggctgtcc
accggcatgctgtgcgcgtcaggcgccagtaacgaaaccggctatttaacgcaaaaattc
acccgcgctctcggcatgctggccgtagacaaccaggcgcgcgtccgacacggaccaacg
gtagcaagtcttgctccaacatttggtcgcggtgcgatgaccaaccactgggtggatatt
aagaacgcgaatttgatcgtcgtgatgggcggcaatgcggcagaagcgcatccggtgggg
ttccgctgggcgatggaagccaaaattcacaataaagccaagctgattgtgatcgatccg
cgctttacccgtacggcatcggtggcggatttctatacgccaatccgttccggcaccgac
attgctttcctgtcgggcgtactgctgtacctgatcaccaataacaaaattaaccgcgag
tacgtcgaggcctacaccaacgccagcctgctggtgcgggaagactttgcctttgaagac
ggcctgttcagcggttacgacgccgacaaccacaagtacgacaaaaccacctggaactac
cagctggacgaaaacggctacgccaagcgcgacgttacgctgcaggatccgcgctgcgtg
tggaacatgctgaaagagcacgtcagccgctatacgccggacgtggtggagaatatctgc
ggcacgccgaaggccgacttcctgcaggtgtgcgaatacatcgccgaaaccagcgcccac
gaccgcaccgcatcgttcctgtatgcgctgggctggacgcagcactcggtcggtgcgcag
aacatccgcaccatggcgatgatccagctgctgctgggcaatatgggcatggcgggcggc
ggcgtcaacgcgctgcgcggccactccaacattcaggggctgaccgacctgggcctgctg
tcgcagagcctgccgggctacctgaccctgccgtccgaacagcagaccgatctgaacggc
tacctgaacgccaacacgccgaaggcgctgctgccggggcaggtcaactactggagcaac
tacccgaaattcttcgtcagcctgatgaagagcttctacggcgacaaggcgcagaaagag
aacgactggggctttgactggctgccgaagtgggataaaggctacgacgtgctgcagtac
ttcgaaatgatggcgcagggcaaggtcaacggctacttctgccagggctttaacccggtg
gcgtcgttcccgaacaaaaacaaggtcgttgcctcgctgtccaagctgaagttcctggtg
accatcgacccgctgaataccgaaaccgccaacttctggcagaaccacggcgagtttaac
gacgtggatccgtcgcagattcagaccgaggtcttccgcctgccgtccacctgctttgcc
gaggagaacggctcgatcgtcaactccgcgcgctggctgcagtggcactggaagggcgcc
gatggcccgggcgaggcgatgaacgacggtgaaattctgtcgggcatcttcagccggctg
cgcgagatgtacgcgcgcgacggcggcgcgacgccggagccggtgctgaatatgacctgg
gactacctgacgccggaaaatccgtcgccggaagaggtggcgcaggagagcaacggcaag
gcgctggcggatattctcgacgccgacggcaaggttctggtgaaaaaaggccagcagctg
agcaccttcgcccatctgcgcgacgacggcaccaccgccagcggctgttggatcttcgcc
ggcagctggacgccggaaggcaaccagatggcgcgtcgcgacaacgccgacccgtccggc
ctcggcaatacgctggactgggcctgggcgtggccgcttaaccgccgcattctgtataac
cgcgcctcggccgacccgtccggcaagccgtgggatccgaagcgtcagatgctggagtgg
gacggcgccaagtggaccgggatggatgtgccggactacagcaccgccgcgccggacagc
gacgtcgggccgtttatcatgcagccggaaggcatgggacgtctgttcgccatcgataaa
atggcggaagggccgttcccggaacactacgagccgtttgaaacgccgctcggcaccaac
ccgctgcatccgaaggtggtgtccaacccggcggcgcgcgtgtttaaagacgatctggcg
acgatgggcaaatccgacaagttcccgtacgtcggcaccacctaccgtctgaccgagcac
ttccactactggaccaagcacgcgcggctcaacgccattgcgcagccggagcagtttgtg
gagatcggcgaaaaactggcgcagaagaaaggcatcaaacagggcgatacggtcaaagtc
agctccaaccgcggctatatcaaggccaaggcggtggtgaccaagcgtatccgcacgttg
caggtgaatggtcaggaggtcgacaccatcggcatcccgatccactggggctacaccggg
gtggcgaaaaaaggcttcctggccaataccctgacgccgtttgtcggcgacgccaatacg
cagacgccggagttcaaggcgttcctggtcaacgtggaaaaggtgtaa
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