Serratia rubidaea: AXX16_0522
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Entry
AXX16_0522 CDS
T04417
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
srz
Serratia rubidaea
Pathway
srz03030
DNA replication
srz03430
Mismatch repair
srz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXX16_0522
03430 Mismatch repair
AXX16_0522
03440 Homologous recombination
AXX16_0522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srz03032
]
AXX16_0522
03400 DNA repair and recombination proteins [BR:
srz03400
]
AXX16_0522
Enzymes [BR:
srz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXX16_0522
DNA replication proteins [BR:
srz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXX16_0522
DNA repair and recombination proteins [BR:
srz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXX16_0522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AML56261
UniProt:
A0A126VD51
LinkDB
All DBs
Position
complement(568397..569497)
Genome browser
AA seq
366 aa
AA seq
DB search
MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLLLTGTDLEMEMVARVALS
QPHEAGATTVPARKFFDICRGLPEGAEIAVTLEGERMLVRSGRSRFSLSTLPAADFPNLD
DWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGAELRTVATDGHRLAVC
AMPIEQQLPLHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYVSHNQLKITANNPEQE
EAEEILDVAYEGTEMEIGFNVSYVLDVLNALKCEEVRLLLTDSVSSVQIEDAASQAAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtcgaacgtgagcatctgctaaaaccgttgcaacaggtgagcagcccg
ctgggcggccgcccaacgctgccgatcctgggtaacctgctgctgcaggtgacggaaggt
tccctgttgctgaccggtaccgatctggagatggagatggtggcgcgcgtcgccttgtcc
caaccccatgaggcgggcgcgactaccgtccccgcgcgtaaattctttgatatctgccgt
ggtctgccggaaggcgccgagatcgccgtgaccctggaaggggaacggatgctggtgcgc
tccgggcgcagccgtttctcgctgtccaccctgccggcggcggatttcccgaatctggac
gactggcaaagcgaggtggagttcaccctgccgcaggcgacgctgaagcgcctgattgaa
gcgacccagttctccatggctcaccaagacgtgcgctattacctgaacggcatgctgttt
gaaaccgaaggcgcggagctgcgcaccgtcgccaccgacggccaccggctggcggtctgc
gcgatgccgattgagcagcagctgccgctgcattcggtgatcgtgccgcgtaaaggggtg
atggagctggtgcgcctgctggacggcggcgatacgccgctgcagctgcagatcggcagc
aacaacatccgcgcccacgtcggtgattttatcttcacttccaagctggttgacggccgt
ttcccggattatcgccgcgtattgccgaagaatccggataaaacgctggaagccggctgc
gatttgctgaagcaggcgtttgcccgcgcggccatcctgtcgaacgagaagttccgcggc
gtgcggctgtacgtcagccacaatcagctgaagatcaccgccaataacccggagcaggaa
gaagcggaagagatcctcgacgtggcctatgaaggcaccgagatggagatcggcttcaac
gtcagctatgtgctggacgtgctgaacgcgctgaagtgcgaagaggtgcgcctgctgctg
accgactcggtctccagcgtgcagattgaagacgcggcgagccaggcggcggcctatgtt
gtcatgccaatgcggttgtga
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