Serratia rubidaea: AXX16_0526
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Entry
AXX16_0526 CDS
T04417
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srz03016
]
AXX16_0526
Transfer RNA biogenesis [BR:
srz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AXX16_0526
Prokaryotic type
Methyltransferases
AXX16_0526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AIG1
ABC_tran
Roc
AAA_28
SRPRB
Arf
Gtr1_RagA
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AML56265
LinkDB
All DBs
Position
574139..575503
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AA seq
454 aa
AA seq
DB search
MNTTDTIVAQATPPGRGGVGILRISGKKAAEVAQVLLGKLPKPRYADYLPFRDADGATLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRVLALPGVRIAQPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAMNSLQGAFSSRIHQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNAVIGDLDQVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWSEIEQADRVL
FMVDGTTTGATEPAEIWPEFMARLPDTLPITVVRNKADITGEAQGITEVNGHSLIRLSAR
TGDGIDVLRDHLKQSMGFTSNMEGGFLARRRHLQALELAAQHLLQGHEQLVSAYAGELLA
EELRQAQLALSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaataccactgataccattgtcgcccaagccaccccgccgggacgcggcggcgtcggc
attctgcgcatctccggcaagaaagccgccgaggtcgcccaggtgctgctcggcaaattg
cccaagccgcgctacgctgactacctgccgttccgcgacgccgacggcgctaccctcgat
cagggcattgcgctgtggttcccggggccgaattcatttaccggcgaagacgtgctggag
ctgcagggccacggcggcccggtgatcctcgatttgctgcttaagcgcgtgctggcgctg
cccggcgtgcgcattgcgcagcccggcgaattctccgagcgcgccttcctgaacgataag
ctcgatctggcgcaggcggaggcgattgccgacctgatcgacgccagctccgagcaggcg
gcacgctcggcgatgaactcgctgcagggcgctttttccagccgtatccatcagcttgtg
gaagcacttactcacctgcgaatctacgtggaagcggcgatcgactttccggatgaggaa
atcgacttcctgtcggacggtaaaatcgaagcccagctgaacgcggtgatcggcgacctt
gaccaggtgcgtgccgaggcgcgccagggcagcctgctgcgtgaaggtatgaaggtggtg
atcgccggtcggccaaatgccggaaaatccagcctgctcaatgcgttagccggccgtgag
gcggccatcgtcaccgatatcgccggcaccacccgcgacgtgctgcgcgaacatattcat
atcgacggcatgccgttgcatattatcgataccgccggcctgcgtgaggccagcgatgag
gtggaacgtatcggcatcgaacgcgcctggagcgagattgagcaggcggatcgggtgctg
tttatggtggatggcaccaccaccggcgccaccgaacccgccgagatctggccggagttt
atggcgcgcctgcctgatacgctgccgattaccgtggtgcgtaacaaggcggacatcacc
ggcgaagcgcagggcataacagaagtgaatggtcactcacttattcgcctgtcggcgcgt
accggcgacggtatcgacgtgctgcgcgaccatctgaagcagagtatgggcttcaccagc
aatatggaaggcggcttcctggcgcgccgtcgccacttgcaggcactggaactggcggcg
cagcacctgctgcagggccatgaacagttagtgagcgcttacgcgggcgagctgctggcg
gaagaactgcgccaggcgcagctggcgctgagcgaaatcaccggcgaatttacctccgat
gacctgctggggcgcattttctccagcttctgcatcggcaaataa
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