Serratia rubidaea: AXX16_0676
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Entry
AXX16_0676 CDS
T04417
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
srz
Serratia rubidaea
Pathway
srz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AXX16_0676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srz03400
]
AXX16_0676
Enzymes [BR:
srz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXX16_0676
DNA repair and recombination proteins [BR:
srz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXX16_0676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_22
Zn_ribbon_6
TrwB_AAD_bind
AAA_19
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AML56411
LinkDB
All DBs
Position
complement(732223..734340)
Genome browser
AA seq
705 aa
AA seq
DB search
MVGARVCVPWGKQRAIGIVTGCSDSSELPLEKLKPIDSIIDGDSLFSAAMWRILRWASDY
YHYPLGEVLFHALPTLLRQGKPAETAPLWQWFATESGRATPPESLKRARKQQQALAALLQ
RPVYRHQVSELELTDNALQALRAKGLADLRTQSVALQDWRPGFSVQGERLRLNTEQATAV
GAIRSEDEQFAAWLLAGITGSGKTEVYLSVLENILAKGKQALVLVPEIGLTPQTIARFRE
RFNAPVEVLHSGLNDSERLSVWLRARSGEAAIVIGTRSALFTPFARLGVIIIDEEHDSSY
KQQEGWRYHARDLAVFRAHTENIPMVMGSATPALETLHNVQLGKYRQLKLTQRAGNAKPA
AQHLIDLKGLPLKVGLSQPLLHSMRHHLKNDNQVMLFLNRRGYAPALLCHECGWIAECQR
CDRYYTLHQNHRQLRCHHCDSQRPVPHQCPQCGSTHLVSVGVGTEQLENELAPLFPDTPI
TRIDRDTTSRKGSLEQHLNEIHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD
FRSAERFAQLYTQVSGRAGRAGKQGEVLLQTHHPEHPLLQTLLQQGYDAFAKQALGERNS
VFLPPYTSHIMLRADDHDNQQAPMFLQQLRNLLEASPLKDDSLWVMGPVPALQSKRGGRF
RWQLLLQHPSRRVLQGIMKNTLPLIGTLPQARKVKWTLDVDPIDG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtggtcggcgcgcgcgtttgcgtaccctggggaaagcagcgcgccatcggcatcgtcacc
ggatgcagcgacagcagcgagctgccgctggaaaaactcaaaccgatagacagcatcatc
gacggcgattcactgttttccgccgcaatgtggcgcatcctgcgctgggccagcgactat
taccactatccgctcggcgaagtgctgtttcatgcgctgccgaccctgctgcgccagggt
aaaccggcggaaaccgcgccgctgtggcagtggttcgccaccgagtccgggcgcgctacg
ccgccggaaagcctgaaacgcgcccgcaaacagcagcaggcgctcgccgccctgctgcag
cgtccggtttaccgtcaccaggtcagcgaactcgaactgaccgacaatgcgctgcaggcg
ctacgcgccaaagggctggccgacttgcgcacgcagagcgtggcgctgcaggactggcgg
cccggcttcagcgtgcagggcgaacggctgcggctcaataccgagcaggccaccgccgtc
ggcgccatccgcagcgaagatgaacagttcgccgcctggctgctggccgggatcaccggc
tccggcaagaccgaggtctatctcagcgtactggaaaacatcctggcgaagggaaagcag
gcgctggtgctggtgccggaaatcggtctgacgccgcagaccatcgcccgctttcgcgag
cgtttcaacgcgccagtggaggtactgcactccggtctgaacgacagcgagcgcctgtcc
gtctggctgcgcgcccgcagcggcgaggcggcgattgtcatcggcacccgctcggcgctg
tttacgccgttcgcccgcctgggcgtcatcattattgatgaagaacacgacagctcgtac
aagcagcaggaaggctggcgttaccacgcgcgcgatctggcggtgttccgcgcccatacg
gaaaatattccgatggtgatgggctccgcgacgccggcgctggaaacgctgcataacgtg
cagctgggcaaataccgtcagttaaaactgacgcaacgcgccggcaacgccaaaccggcc
gcccagcacctgatcgacctgaaaggcctgccgctgaaggtcggcctgtcgcaaccgctg
ctgcacagcatgcggcaccacctgaaaaacgataatcaggtgatgctgtttctcaaccgt
cgcggctatgcgccggcgctgctgtgtcacgaatgcggctggatcgccgaatgtcagcgc
tgcgaccgttactacaccctgcaccagaatcaccgccagctgcgctgccaccactgcgac
agccagcgcccggtgccgcaccagtgcccgcaatgcggctcaacgcatctggtatcggtc
ggcgtcggcaccgaacagctggaaaacgagctggcgccgctgttccctgacacgccgatt
acccgtatcgaccgcgacaccaccagccgtaaaggctcgctggagcagcatctgaacgag
atccaccgcggcggcgcgcgtattctgatcggtacgcaaatgctggcgaagggccaccac
ttcccggacgtgacgctggtagcgctgctggacgtcgacggcgcgctgttttccgccgac
ttccgctccgccgaacgcttcgcccagctgtatacccaggtatccggccgcgccggccgc
gccggcaagcagggtgaagtgctgctgcagactcaccacccggagcacccgctgctgcag
acgctgctgcaacaaggctacgacgcctttgccaaacaggcgctgggcgagcgcaacagc
gtcttcctgcccccctataccagccacattatgctgcgcgccgacgatcacgataatcag
caggcgccgatgttcctgcagcaattgcgcaatctgctggaggccagcccgctgaaagac
gattccctgtgggtgatggggccggtgccggcgctgcagtccaaacgcgggggacgtttc
cgctggcagctgctgctgcaacacccgtcgcgccgcgttttgcaggggattatgaaaaac
accctgccgctgatcggcaccctgccgcaggcacgcaaagttaaatggacgctggacgtc
gatcccatcgacggttga
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