Serratia rubidaea: AXX16_0706
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Entry
AXX16_0706 CDS
T04417
Name
(GenBank) HTH-type transcriptional regulator hdfR
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srz03000
]
AXX16_0706
Transcription factors [BR:
srz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AXX16_0706
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Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AML56434
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Position
complement(765383..766270)
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AA seq
295 aa
AA seq
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MTACKTKHLNLNDKKILEKGVDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLE
NQLGANLFTRHRNNIRLTPAGERLLPYAESLMNTWQLAKKEVVRSPQHGELSIGASASLW
EAYLTPWLQSLYQQRETLQLEARIALRHSLVKQLHERQLDLLITTEPPKMDELTSQLLGN
FSLRLFSSSLRDQQTPMPYIKLEWGADFHQQESRMLDAETVPVLTTTSAHLTRQLLETTG
GCAFLPSQWEKEYPNLVANAEVPSITRPLYAVWLQNSDQQPLIRQLLKIPLNTAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
ttgacagcgtgtaaaacaaaacatttaaatcttaacgacaaaaaaattttggagaaaggc
gtggataccgaattactgaaaacctttttggaggtcagtagaacgcgtcactttggccga
gccgcagaatctctgtatttaacgcagtctgcggtcagtttccgcattcgtcagctggaa
aatcaattaggtgcgaatttattcacccgccaccgtaataatattcgtctgacgccggcc
ggggagcgtctgctaccctacgcggaaagcctgatgaacacctggcagctggccaaaaaa
gaggtcgtacggtcacctcagcacggcgaactgtcaatcggtgccagcgcatcattatgg
gaagcctacctgaccccgtggctccaatcgctttaccaacagcgggagacattgcagctg
gaagcacgcatcgcattgcggcattcgctggtaaaacagctgcacgaaagacagctcgat
ttactgattaccaccgagccgcccaagatggatgaattaaccagccagctgctgggcaac
ttttcgttacgactcttttcctcatccctgcgcgatcaacagacgccgatgccctatatc
aaactggaatggggagcggattttcatcagcaggaaagccgcatgctggatgcggagacc
gtgccggttctgacgaccacctcggcgcacctgacacgtcagctgttggaaaccaccggc
ggctgcgcttttttaccaagccaatgggaaaaagagtatccgaacctggtcgccaacgcg
gaagtgccaagtattacacgcccgctgtatgccgtttggttgcaaaacagcgatcagcag
ccgcttattcgtcagttactaaaaatacctttaaataccgcagcatga
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