Serratia rubidaea: AXX16_0829
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Entry
AXX16_0829 CDS
T04417
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srz03400
]
AXX16_0829
DNA repair and recombination proteins [BR:
srz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AXX16_0829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
ResIII
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_16
SLFN-g3_helicase
AAA_19
T2SSE
AAA_30
DEAD
AAA_7
AAA_28
SRP54
CbiA
P-loop_TraG
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AML56557
LinkDB
All DBs
Position
904145..905671
Genome browser
AA seq
508 aa
AA seq
DB search
MSEARIIAKAMKDGKPVQDLAILPALANRHGLITGATGTGKTVTLQKMAEQFSRIGVPVL
LSDVKGDLSGIGTEAVPNEKLQARLTAIGVADWQPQACTIIPWDIYGEKGHPIRATVSDL
GPLLLARLLDLNEVQSGVLQLVFKIADDNALLLLDMKDLRAMVQYVGDNAKQFKTQYGNI
STASVGAIQRGLLTLEEQGANLFFGEPMLDINDLMKTDANGHGVINLLAADKLINQPKLY
SVFLLWLLAELFEHLPEVGDPEQPKLVFFFDEAHLLFKDAPAALLTKIEQVVRLIRSKGV
GVYFVTQNPLDIPDSVLGQLGNRVQHALRAFTPRDQKAVKAAAQTMRANPDFDAETVIGE
LGVGEALVSFLDEKGRPHVVERAMVIAPESKMGMLGAEGLNSAINKSPLYGRYEEMVDRE
SAYEKLSSEGFATVGQDAEAVDKAAPQAGQQSGGGLMGSLNELLFGSTGPRGGKRDGIVQ
TAAKSMARDLSKQILRGVLGSIMGGRKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcacggattatcgccaaggcgatgaaagacggaaaacccgttcaggatttg
gcgattctgcccgccttggctaaccgccacggcctgattaccggcgcgaccggtaccggt
aaaaccgtgacgttgcaaaaaatggccgaacagttttcacgcatcggcgtgccggtgtta
ctgtcggacgtgaagggcgacctgtcggggatcggcaccgaggcggtgccgaatgaaaaa
ctgcaggcgcgcctgacggcgattggcgtcgccgactggcagccgcaggcctgcaccatt
atcccgtgggatatctacggcgagaaaggccacccgatccgcgccacggtttccgatctc
ggcccgctgctgctggcgcgtctgctggacctgaacgaggtgcaaagcggcgtgctgcag
ctggtgtttaaaatcgccgacgataacgcgctgctgctgttggatatgaaagacctgcgc
gcgatggtgcagtacgtcggcgacaatgccaaacagttcaaaacccagtatggcaatatt
tccaccgcctcggtcggcgcgatccagcgcggcctgctgacgctggaggagcagggcgcc
aacctgttcttcggcgagccgatgctcgacatcaacgatctgatgaaaaccgacgccaac
ggccatggcgtgatcaatctgctggcggccgacaagctgattaaccagccgaagctctat
tcggtatttctgctgtggctgctggcggagctgtttgaacatctgccggaagttggtgac
ccggagcagccgaagctggtgttcttctttgatgaggcgcacctgttgttcaaagacgcg
ccggcggcgctgctgaccaagattgagcaggtggtgcgtctgatccgttccaaaggcgtc
ggcgtttactttgtgacgcaaaacccgctggatattccggacagcgtgctcggccagctg
ggcaaccgcgtgcagcacgcgctgcgcgcctttacgccgcgcgaccagaaggcggtgaag
gcggcggcgcagaccatgcgcgccaacccggactttgatgcggaaacggtgattggcgag
ctgggcgtcggggaggcgctggtgtcgttcctcgatgagaaggggcgtccccatgtggtg
gagcgcgcgatggtgatcgcgccggagtcaaaaatgggcatgctgggggcggaagggctg
aacagcgccattaataaatcgccgctgtacggccgctatgaagagatggtggaccgtgaa
tcggcctatgagaagctgtcatccgagggctttgccaccgtcggccaggatgcggaggcg
gtggataaagcggcgccgcaggccggccagcaaagcggcggcggcctgatgggcagtctg
aatgagctgctgttcggctccaccggcccgcgcggcggcaaacgtgacggcattgtacag
accgctgccaaaagcatggcgcgcgatctgagcaagcaaattctgcgcggcgtgctgggt
tcgatcatgggcggccgtaaaaagtaa
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