Serratia rubidaea: AXX16_0898
Help
Entry
AXX16_0898 CDS
T04417
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srz03009
]
AXX16_0898
Enzymes [BR:
srz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
AXX16_0898
Ribosome biogenesis [BR:
srz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AXX16_0898
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
FtsJ
MTS
Methyltransf_37
Methyltransf_5
Cons_hypoth95
Methyltransf_12
Methyltransf_33
Methyltransf_24
Methyltransf_11
Methyltransf_15
Ubie_methyltran
TRM5-TYW2_MTfase
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
AML56626
LinkDB
All DBs
Position
complement(958178..959449)
Genome browser
AA seq
423 aa
AA seq
DB search
MKNNYNLRSIAAQTIGQVLDQGQSLSTLLPALNNKISDKDRALLQELCFGTLRVLPQLEW
CIQQLMAKPMVGKQRTLHYLLMVGMYQLLYTRIPAHAALAETVNGAVALKRPQLKGLING
VLRQFQRQQEALMQRAANHDSRYLHPSWLLKRIQQAYPEQWQQIVDANNQKPPMWLRVNR
RHHSRDDYLQLLAQAGIEAVAHGEYPDAVRLLTPCAVSSLPGFTDGWATVQDASAQGCVD
LLDPQDGEQILDLCAAPGGKTTHILEAAPQAHVMAVDIDEQRLSRVKENLQRLQCHAEVK
QGDGRTPQQWCGDKQFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELASLQAEILDAI
WPHLKSGGVMVYATCSILPQENSQQLQAFLQRHNDASLVGVERQNLPHPEDGDGFFYAKL
IKM
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataattacaacctccgcagcatcgctgctcaaaccatcggccaggtgttggat
caggggcaatcgctcagcaccctgctgccggcactgaataacaaaatttccgataaggac
cgcgccctgctgcaggaactgtgcttcggcacgctgcgcgtgctgccgcagctggagtgg
tgcatccaacagctgatggcgaaaccaatggtcggcaagcagcgtacgctgcactacctg
ctgatggttggcatgtaccaactgctgtatacccgcattccggcccacgcggccctggcg
gaaacggtcaatggcgcggtggcgctgaaacgtccgcagcttaagggattaatcaacggc
gtactgcgccagttccagcgccagcaggaagcgctgatgcaacgtgcggccaatcatgac
agccgctatctgcaccccagctggctgctgaagcgcattcaacaggcttaccctgaacag
tggcagcagatcgtcgacgccaataatcaaaagccaccaatgtggctgcgggttaaccgc
cgtcaccacagtcgcgatgactatctgcagctgctggcgcaggccggaattgaggccgtc
gcgcatggggaataccctgacgcggtgcgcttactcactccgtgtgcggttagcagcctg
ccgggctttaccgatggctgggccaccgtgcaggatgcctccgcgcaaggctgcgtcgat
ctgctggatccgcaggatggcgagcagatcctggacctgtgcgcggcacccggcggtaaa
accacccatatcctggaagcggcgccgcaggcgcacgttatggccgtggatattgatgag
cagcgtctgagccgggtaaaagaaaacctgcagcgtttacagtgccacgccgaggtcaaa
cagggcgatggccgtacgccgcagcagtggtgcggtgataaacagtttgatcgcattctg
ttggacgccccttgctccgccaccggcgtgattcgccgtcatccggatattaaatggctg
cgccgcgatagcgacatcgccgaactggctagcctgcaggcggaaattcttgatgccatt
tggccacacctgaagagcggcggcgtgatggtttatgccacctgttcgatcttaccgcaa
gaaaatagccagcagttgcaggccttcctgcagcgccataacgacgccagcctggtcggt
gtcgaacggcagaaccttcctcaccctgaagatggcgatggcttcttttacgctaagctg
attaaaatgtaa
DBGET
integrated database retrieval system
