KEGG   Serratia rubidaea: AXX16_1113
Entry
AXX16_1113        CDS       T04417                                 
Name
(GenBank) VgrG protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
srz  Serratia rubidaea
Pathway
srz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:srz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AXX16_1113
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:srz02044]
    AXX16_1113
Secretion system [BR:srz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AXX16_1113
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Gp5_C Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: AML56835
LinkDB
Position
1197912..1200083
AA seq 723 aa
MFWSLQGSEQLSRPYVFQVDLLSQNFHIDRRSLLGQTVTLEIPTQNLLTPRYLNGKVTAA
AVRSEDINDTRYAVYQLKLEPDIWPMLRDRNFRIFQQQTVPDIVKTLLAEQNVACEDQLT
GSYRQWEYCVQYQESSYNFISRLMELEGIYYFWRHEMGKQTLVLMDAPQQHKPFEGYESI
PYHVTPSGGSTSEEGVSRWAVNDVVTPGIYSIDDYDFRKPNAWLFQARQNPASPQPGQID
VYDWPGRFVDHQHGEFYARVRQEAWQAEHQQISATATALGIAPGHTFTLRNAPYAADNGQ
YLVTQAEYHLRENRYASGGESSEHRIDFNVMPADVPFRPEQLAEWPKTCGPQTAKVVGPK
GESIWTDKYGRIKVKFHWDRLAAGDDTSSCWVRVSSAWAGQGFGGVQIPRVNDEVVIDFI
NGDPDRPIVIGRVYNEASMPPWALPAAATQMGFMSRTKDGTADNANALRFEDKAGSEQVW
IQAERNMDTNVKNDESHTIGSNRTKTVGADETSHIKQNRTKNVDGNETVAIGQNRTKTIS
GNETTTVKQNRTETVEGSETLTVQQSRNETITGDHSATVKSNHTSTVEGNQVMTVNQDRT
RTVNGNENVNVVKNRDVVVKGHQTLGITGNRTASVSGNENKVITKMQDVSIGEGRKIVIG
GVDTRYTDGTVSDSASKSFNISVGDSAGISILPGSIEIVAGGASITINGSGVMVNGTKIE
LNA
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgttctggtcgctgcagggcagcgaacagctcagtcgtccctatgttttccaggttgat
ctgcttagccagaacttccatatcgaccggcgctcgctgctcgggcagaccgtcacgctg
gaaatccccacgcagaatctgctgacgccccgttacctgaacggcaaggtgacggcggca
gcggtgcgcagcgaggacatcaatgatacgcgctatgcggtttatcaactgaagctggag
ccggatatctggccgatgctgcgtgaccgcaacttccgtatcttccagcagcagacggtg
ccggacatcgtcaaaaccctgctggcggagcagaacgtcgcctgcgaggatcaactgacc
ggcagctaccgtcagtgggaatactgcgtgcagtatcaggaaagcagctacaactttatc
agccggctgatggagttggagggcatctactatttctggcgccatgaaatgggcaaacag
acgctggtgttgatggatgcgccccagcagcataagccgttcgaaggctacgaaagcatt
ccctatcacgttacgccttccggcggcagcaccagcgaagagggcgtcagccgctgggcg
gtcaacgatgtcgtcacgccggggatttacagcattgacgactacgactttcgcaaaccg
aacgcctggctgttccaggcgcggcagaaccccgcctcgccgcagccggggcagattgac
gtctatgactggccggggcggtttgtcgatcaccagcacggcgaattttacgcgcgcgtg
cgtcaggaggcctggcaggcggagcatcagcagatcagcgctacggcgacggcgctgggc
attgcgcctgggcacacgtttaccctgcgcaatgcgccttacgccgctgataacggccag
tatctggtgacgcaggcggaatatcacctgcgagaaaaccgctacgccagcggcggagag
agcagcgagcaccgcatcgacttcaacgtgatgccggcggatgtgcctttccggccggag
caattggccgagtggccgaagacctgcgggccgcagaccgccaaggtggtggggccgaag
ggggaatcgatctggactgataaatatggccgcatcaaggtgaagttccactgggaccgg
ctggcggcgggcgacgacaccagctcctgctgggtgcgcgtttccagcgcctgggccggc
cagggcttcggcggcgtgcagatcccgcgcgttaacgacgaggtggtgatcgactttatc
aacggcgatcctgaccggccgatcgtgatcggccgcgtgtataacgaagccagcatgccg
ccgtgggcgctgccggcggcggcaacccagatgggctttatgagccgcaccaaagacggc
acggcggacaacgccaacgccctgcgttttgaagacaaggccggttcggaacaggtgtgg
atccaggccgaacgcaatatggacaccaacgttaaaaacgatgagagccataccatcggc
agcaaccgcaccaaaaccgtcggcgctgatgaaaccagccatatcaaacaaaaccgcacc
aaaaatgtcgacggcaatgagacggtggccatcggccagaaccgcaccaaaaccatcagc
ggcaatgagaccaccaccgtgaagcagaaccgcactgaaacggtggaaggcagcgaaacc
ctgacggtgcagcagagccgtaatgaaaccatcaccggcgaccattcggccacggtgaaa
agcaaccacacctcgacggtggaaggtaatcaggtgatgacggtcaatcaggatcgcacc
cgcaccgtgaacggcaatgagaatgtcaacgtggtgaaaaaccgcgacgtggtggtcaag
ggccaccagacgctgggcattaccggcaaccgtacggcctcggtcagcggtaatgagaac
aaggtgatcaccaagatgcaggatgtcagtatcggcgagggccgcaagatcgtgatcggc
ggtgttgatacgcgttataccgacggtacggtaagcgatagcgcgtcgaaaagtttcaat
atcagcgtgggtgactctgccggcatctcgattttgcccggcagcattgagattgtcgcc
ggtggcgccagcattaccatcaacgggagcggtgtgatggtcaacggcaccaaaatagaa
ctcaatgcctga

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