Serratia rubidaea: AXX16_1671
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Entry
AXX16_1671 CDS
T04417
Name
(GenBank) Putative sensory histidine kinase YfhA
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
srz
Serratia rubidaea
Pathway
srz02020
Two-component system
srz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AXX16_1671
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AXX16_1671
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
srz02022
]
AXX16_1671
Two-component system [BR:
srz02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
AXX16_1671
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA_16
AAA_2
HTH_8
AAA
AAA_3
AAA_7
OKR_DC_1_N
nSTAND6
MCM
PDE8A_N
DUF7317
UPF0175
TIP49
Motif
Other DBs
NCBI-ProteinID:
AML57384
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Position
1804219..1805556
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AA seq
445 aa
AA seq
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MTARKAANLLLVDDDPSLLKLLGMRLTSEGFHVTTAESGQEALRLLAREQIDLVISDLRM
DEMDGMALFAEIQKRQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDRDALYKAIDE
ALSLSAPVGDDSWREDIVTRSPAMLRLLEQANMVAQSDVSVLINGQSGTGKEVLAQAIHR
ASPRAKKAFIAINCGALPEQLLESELFGHAKGAFTGAVSSREGLFQAAAGGTLFLDEIGD
MPLSLQVKLLRVLQERKVRPLGSNRDLDIDVRIISATHRDLPKAMAKNEFREDLYYRLNV
VNLKIPALNERAEDIPLLANHLLRESAKRHKPFVRSFSTDAMKRLMTASWPGNVRQLVNV
IEQCVALTSAPVIGEALVEQALEGENTALPTFAEARNQFELHYLRKLLQITKGNVTQAAR
MAGRNRTEFYKLLSRHELDANDFKE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacgtaaagcggccaatttacttctggtcgatgacgatcccagcctgctgaag
ctgctgggcatgcgtctgaccagcgaaggtttccacgtgacgaccgccgaaagcgggcag
gaagcgctgcgcctgctggcgcgcgagcagatcgatctggtgatcagcgacctgcgtatg
gatgagatggacggcatggcgctgtttgccgaaattcagaagcgtcagcccggtatgccg
gtgattattctgaccgcgcacggctccattccggacgccgtggcggcgacccagcagggg
gtattcagcttcctgaccaaaccggtcgatcgcgatgcgttatacaaggcgattgacgaa
gcgctgtcgctgtcggcgccggtgggtgatgacagctggcgtgaggatattgtcacccgc
agcccggcgatgctgcgtctgctggagcaggcgaatatggtggcgcagtcggacgtcagc
gtgctgattaacggccagagcggcaccggtaaagaggtgctggcgcaggcgatccaccgc
gccagcccgcgcgccaagaaagcctttatcgccattaactgcggcgcgctgccggagcag
ctgctggagtcggagctgttcggccatgccaaaggcgcctttaccggcgcggtgagcagc
cgtgaggggctgttccaggcggcggcgggcggcacgctgtttctcgatgaaatcggcgat
atgccgctgtcgctgcaggtcaagctgctgcgcgtgctgcaggagcgcaaggtgcggccg
ctgggcagcaaccgcgatctggatatcgacgtgcgcatcatctcggcgacccaccgcgat
ctgccgaaggcgatggcgaaaaacgaattccgtgaggatctgtactatcgcctgaacgtg
gtgaacctgaagatcccggcgctgaacgagcgcgccgaagatattccgctgctggccaac
catctgctgcgtgagtcggccaaacggcataagccctttgtccgcagcttctccaccgat
gcgatgaagcgtctgatgaccgccagctggccgggcaacgtgcgtcaactggtgaacgtg
atcgaacagtgcgtggcgctgacctcggcgccggtgatcggcgaagcgctggtcgaacag
gcgctggagggtgaaaacaccgcgctgccgacctttgccgaggcgcgcaaccagtttgag
ctgcactacctgcgcaaactgctgcagatcaccaagggcaatgtgacgcaggcggcgcgc
atggcgggccgtaaccgcaccgagttttataagctgttgtcgcgccacgagctggacgcc
aacgattttaaagaatga
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