KEGG   Serratia rubidaea: AXX16_2048
Entry
AXX16_2048        CDS       T04417                                 
Name
(GenBank) VapC toxin protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
srz  Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:srz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srz03016]
    AXX16_2048
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:srz02048]
    AXX16_2048
Transfer RNA biogenesis [BR:srz03016]
 Prokaryotic type
  tRNA degradation factors
   AXX16_2048
Prokaryotic defense system [BR:srz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    AXX16_2048
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: AML57755
LinkDB
Position
complement(2224594..2225010)
AA seq 138 aa
MSHTYMLDTCICSYIMREQPAAAIRRLEQAVMQRHRIVVSAITYAEMRFGAIGKKASPRH
TQLVEAFCSRLDAILPWDRAAVDETTTLKAALAAAGTPIGPNDTAIAGHAIATGAILVTN
NYKEFARVPGLALEDWSA
NT seq 417 nt   +upstreamnt  +downstreamnt
atgagccacacctacatgctggacacctgtatttgctcttacattatgcgcgagcagccg
gcagcggcgatccggcgtctggagcaggcggtgatgcaacgccatcggatcgtggtgtcg
gccattacctatgccgaaatgcgctttggtgcgatcggtaaaaaggcctcaccgcgtcat
acgcagctggtcgaggccttctgcagccgccttgacgccattttgccgtgggaccgcgcc
gcggtggatgaaaccacgacgctgaaggccgcgttggccgccgccggtacgccgatcggg
cccaacgataccgcaattgccggccatgccatcgccactggcgccattctggtcaccaat
aattacaaggagtttgcgcgcgtgcccgggctggcgctggaggactggtcggcatag

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