Serratia rubidaea: AXX16_2586
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Entry
AXX16_2586 CDS
T04417
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srz
Serratia rubidaea
Pathway
srz00061
Fatty acid biosynthesis
srz00071
Fatty acid degradation
srz01100
Metabolic pathways
srz01212
Fatty acid metabolism
srz02024
Quorum sensing
srz04146
Peroxisome
Module
srz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AXX16_2586
00071 Fatty acid degradation
AXX16_2586
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AXX16_2586
09145 Cellular community - prokaryotes
02024 Quorum sensing
AXX16_2586
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srz01004
]
AXX16_2586
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srz04147
]
AXX16_2586
Enzymes [BR:
srz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AXX16_2586
Lipid biosynthesis proteins [BR:
srz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AXX16_2586
Exosome [BR:
srz04147
]
Exosomal proteins
Exosomal proteins of breast milk
AXX16_2586
Exosomal proteins of breast cancer cells
AXX16_2586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
SseB_C
LacAB_rpiB
Motif
Other DBs
NCBI-ProteinID:
AML58285
LinkDB
All DBs
Position
2790340..2791815
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AA seq
491 aa
AA seq
DB search
MEITREFPETPAINDIDNNVTLSYQELKHIAEKRKRTFSLLGVKPGDNVALILPNGVEFI
ASYLALVSLEALPIIINSKLTSWEISQLFDKCHPDFIITFSEFYQKHAALLTPPSPTWQI
LLSDKAPSCAPREGVHHLTQQPDGDAAALTAPQGNPVVALQFTWRGYARPFPVAHRYLEM
TRSTDGLHEHFHPQGVGSVHLVTLPLYAIFGLSVMLIFPLSVGATLLVTNSLLNRDLAEV
LAQHQVTFACLVPDVIRYFKGRLAKRKSAPAGLHPQLMIYSGGGHLPAGEAERLSQLLGC
GPVLQGYGLTESLPIVVQNTRGEQHRGAMGQAIRAAEIRVLGPGGQEVPAGRIGELVVRG
PMIAEGYYQDEEATALFFKDGWLHTGDLVWRDAQGHLFFVCQRLRISKIRAQMIDLAEIE
RVAVRHPQVKRARAWVTRDKHEANVLCLSVEVSDAQLAQQELLTFMGNYLSGFKLPRKID
MLPAQGVEHAA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttggaaattaccagggagtttccggaaacgcctgcaattaacgacattgataataacgtt
acgctcagttaccaggagcttaaacatattgctgaaaagcgaaagcggacttttagtctg
ttaggggttaaacccggggataacgttgcgttaattctgccaaatggcgttgagtttatt
gccagttacctcgcactggtcagcctggaggcactccccattattatcaacagtaaactg
acgtcatgggaaataagtcagctgttcgataagtgtcatcctgatttcattatcaccttc
tcggaattttatcaaaaacacgctgcgctgctgacgccgccatcgccaacgtggcagata
ttattaagcgataaggcgccgtcttgcgcaccccgcgaaggggtacaccatttgacgcag
cagcccgacggtgatgcggcggcgctgacggcgccgcagggcaacccggtcgtggcgctg
cagtttacctggcgtggctatgcgcggcctttccccgtggctcaccgctacctggaaatg
acgcgctctaccgacggactgcacgagcatttccatccgcagggcgttggcagcgtacat
ttggtcacgctgccgctgtacgccatttttggtttgtcggtgatgctgattttccccctc
agcgtcggcgcaacgctgttggtgaccaacagcctgcttaaccgcgatctggctgaggtg
ctggcgcagcatcaggtgacgttcgcctgcctggtgcccgacgttatccgttatttcaaa
ggccgcctggccaagcggaaatcggcgccggcgggtctgcacccgcagctgatgatttat
tccggcggcggacatttaccggccggggaggcggaaaggctcagccaactgttgggctgc
gggccggtgctgcaggggtatggcttgaccgaaagcttaccgatcgtggtgcaaaacacc
cgtggcgaacagcatcgcggagccatggggcaggcgattcgcgctgcggaaattcgcgtg
ctcggccccggcgggcaagaggtgccggcgggacgcatcggcgaactggtggtgcgcggc
ccgatgattgccgaaggatattaccaggatgaggaagccaccgcgctgttcttcaaggat
ggctggctgcacaccggcgatctggtgtggcgtgatgcgcaggggcacctgttctttgtc
tgccagcggctgcgcatttctaaaatccgggcgcagatgatcgatctggccgagatagag
cgggtggccgtacgtcatccgcaggtgaaacgggcgcgggcctgggttacgcgcgataaa
catgaggccaacgtgttgtgcctcagcgtcgaggtgtccgatgcgcagctggcccagcag
gagctgttgacgtttatgggcaactatctttcggggttcaagctgccgcggaaaatcgac
atgctgcctgcccagggggtggagcatgccgcatga
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