Serratia rubidaea: AXX16_2604
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Entry
AXX16_2604 CDS
T04417
Name
(GenBank) Crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
srz
Serratia rubidaea
Pathway
srz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AXX16_2604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srz03400
]
AXX16_2604
Enzymes [BR:
srz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
AXX16_2604
DNA repair and recombination proteins [BR:
srz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXX16_2604
RecFOR pathway proteins
AXX16_2604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
NeuB
DUF3882
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
AML58303
UniProt:
A0A126VJ22
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All DBs
Position
2808795..2809316
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AA seq
173 aa
AA seq
DB search
MAIILGIDPGSRITGYGLIRQQGRQLSYIASGCIRTVVDDMPTRLKLIYAGVSEIITQFQ
PDFFAIEQVFMAKNPDSALKLGQARGVAIVAAVNQNLEVFEYAARQVKQTVVGTGAAEKA
QVQHMVRSLLKLSASPQADAADALAIAITHCHLSQNVLRMSEGRLSMARGRLK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcgattatccttggtatcgaccccggctcgcgcattaccggctacggcctgattcgc
cagcaggggcgtcagctgtcgtatatcgccagcggctgcatccgcaccgtggtggacgat
atgccgacgcggctgaagctgatttacgccggcgtcagcgaaatcattacgcagttccaa
ccggatttcttcgccatcgaacaggtgtttatggccaagaacccggattcggcgctcaag
ctgggacaggcgcgcggcgtggcgatcgtcgccgcggttaaccagaacctcgaagtgttt
gagtacgccgcccgtcaggttaagcagacggtggtcggcaccggtgcggcggagaaggcg
caggtgcagcacatggtgcgttcactgctcaagctttccgccagcccgcaggcggacgcc
gccgatgcgctggcgattgccatcacccactgccatctcagccagaacgtgctgcggatg
agcgaagggcgcttaagtatggcacgcgggcgtttaaaataa
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