Serratia rubidaea: AXX16_2623
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Entry
AXX16_2623 CDS
T04417
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srz
Serratia rubidaea
Pathway
srz00061
Fatty acid biosynthesis
srz00071
Fatty acid degradation
srz01100
Metabolic pathways
srz01212
Fatty acid metabolism
srz02024
Quorum sensing
srz04146
Peroxisome
Module
srz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AXX16_2623
00071 Fatty acid degradation
AXX16_2623
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AXX16_2623
09145 Cellular community - prokaryotes
02024 Quorum sensing
AXX16_2623
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srz01004
]
AXX16_2623
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srz04147
]
AXX16_2623
Enzymes [BR:
srz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AXX16_2623
Lipid biosynthesis proteins [BR:
srz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AXX16_2623
Exosome [BR:
srz04147
]
Exosomal proteins
Exosomal proteins of breast milk
AXX16_2623
Exosomal proteins of breast cancer cells
AXX16_2623
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AML58322
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All DBs
Position
2827085..2828806
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AA seq
573 aa
AA seq
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MIMRNDFGSNTLEKVWLKRYPADVPAEIDADRYPSLVEVFENAVRHYADQPAFINMGEVM
TYRKLEERSRAFAAYLQNELGLKKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYT
PRELEHQLNDSGASAIVIVSNFAHTLEKVVFKTQVKHVILTRMGDQLSAAKGTLVNFVVK
YIKRLVPKYDLPDAISFRTALQRGRRLQYVKPDIINSDLAFLQYTGGTTGVAKGAMLTHR
NMQANLEQAKAAYAPLFRAGQELVVTALPLYHIFALTVNCLLFIDLGGRNLLITNPRDIP
GLVKELAKYPFTALSGVNTLFNALLNNEEFLKLDFSTLRFSVGGGMAVQKAVADKWEQTT
GKHLLEGYGLTECAPLVAGNPYDLQHYSGSIGLPVPSTDVRLVNDQGQDAAPGEPGELWV
KGPQVMLGYWQRPDATDEVLKDGWLATGDIVTVDEQGFIRIVDRKKDMILVSGFNVYPNE
IEDVVSQHAKVLECAAIGVPSEASGETVKICVVKKDPSLTKEELLTHCRRHLTGYKVPKI
VEFRDELPKSNVGKILRRELRDEQAKPKAADAA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgataatgagaaatgatttcgggagtaataccttggaaaaggtctggttaaaacgttat
ccggcagatgtgccagcagagattgacgccgatcgctatccgtcattggtggaagtattt
gaaaatgccgtgcggcattatgcggatcagcccgcgtttatcaatatgggcgaggtgatg
acctaccgcaagctggaagagcgcagccgggcattcgccgcctatttacaaaatgagctg
gggctgaagaagggcgatcgcgtcgcgttgatgatgccaaacctgctgcagtatcccatt
gcgctgtttggcattctgcgcgccggcatggtggtggttaacgtgaacccgctctatacg
ccgcgcgaactggagcatcagctcaatgacagcggcgccagcgccattgttatcgtctcc
aactttgcccatacgctggaaaaagtggtcttcaagacccaggttaagcacgtgatcctg
acgcggatgggcgatcagctctcggcggccaaaggcacgctggtcaactttgtggtgaaa
tatatcaaacgtctggtgcccaagtacgatttgccggacgccatctctttccgcacggcg
ctgcagcgcggccgccgcctgcaatatgtcaaaccggacatcattaacagcgatctggcc
tttttacagtacaccggaggcaccaccggggtggcgaagggcgcgatgctgacccatcgc
aatatgcaggccaatctggagcaggccaaggcggcctatgcgccgctgttccgcgccgga
caagagctggtggtgaccgcgctgccgctgtaccacatctttgcgctgacggtgaactgc
ctgctgtttatcgacctgggcggccgtaatctgctgattaccaacccgcgcgatattccc
ggcctggtgaaagagctggccaaatacccgtttaccgccctgagcggcgtcaataccttg
ttcaatgcgttgctcaataacgaagagttcctcaagctggacttctcgacgctgcgcttc
tcggtcggcggcggcatggcggtgcaaaaggcggtggcggacaaatgggagcagaccacc
ggcaagcatctgctggaaggctatggcctgaccgagtgcgccccgctggtggccggcaac
ccgtatgacctgcagcattacagcggcagcatcggtttgccggtaccgtcgaccgacgta
cgtctggtgaatgaccaggggcaggatgccgccccgggcgagccgggcgaactgtgggtc
aaagggccgcaagttatgttaggctattggcaacgtcctgatgccacggatgaagtgctg
aaagacggctggctggcgaccggtgatatcgttacggtggatgaacagggctttattcgc
atcgtcgatcgtaaaaaagatatgattttggtgtcgggttttaacgtttatccgaatgaa
attgaggatgtcgtcagccaacatgctaaagtgctggagtgcgcggcgattggcgtgccg
agcgaagcctccggtgaaaccgtgaaaatttgcgtggtgaagaaggatccttcgctgacc
aaggaagagttgctgacccattgccgtcggcacctgaccgggtataaagtgcctaaaatt
gttgagttccgcgacgagttgccgaagtcgaacgtcggcaaaattctgcggcgagaactg
cgtgacgaacaggcgaaacccaaggcggctgacgccgcctga
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