Serratia rubidaea: AXX16_2949
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Entry
AXX16_2949 CDS
T04417
Name
(GenBank) Transcriptional regulator, AraC family
KO
K07506
AraC family transcriptional regulator
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srz03000
]
AXX16_2949
Transcription factors [BR:
srz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AXX16_2949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AML58646
LinkDB
All DBs
Position
complement(3171882..3172760)
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AA seq
292 aa
AA seq
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MSAYKAFATLHEHKAQLHHHLRLASGVELAAWSNCDDRITQESADHHTLSLYVADGYECY
QKVPGGWRNGGGPDHFCIMPRQYESTWDVRSSLSFVHLYCTDGHLRQLVEQTWDRSPAAI
NVEARSFGEDAQITRLYRQFLLNVDWQECANQLTISSAAGMLMSHLLQHYTQLQWRLPSV
RGGLAPAVLRRVCEFIHEHLEQPLLLGELAAQAGLSEFHFARMFKHDTGLAPHQYVMRAR
LQRAAHLLRHGVLPITQIALASGFSSASHFSNRFKTYYGMTPQQMRQGNAPA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtacaaggcgtttgccaccctgcatgagcataaggcacagctgcatcatcac
ctgcgcctggcgtccggcgtggagctggctgcctggtccaactgcgacgatcgcatcacc
caggaaagcgccgaccaccataccctcagcctgtacgtcgccgacggctacgagtgctac
caaaaagtgccgggcggctggcgcaacggcggcgggccagaccatttctgcattatgccg
cgccagtatgagtcaacctgggacgtgcgcagcagcctgtcgtttgtccatctgtactgt
accgatggtcatctgcggcagctggttgaacagacctgggatcgcagcccggcggcgatc
aacgtcgaggcgcgctctttcggtgaagatgcgcagattacgcggctttaccggcagttt
ttgctgaacgtcgactggcaggagtgcgccaaccagctgaccatcagcagcgcggccggc
atgctgatgtcgcacctgctgcagcactatacccagctgcagtggcggctgccgtcggtg
cgcggcgggctggcgccggcggtgctgcgccgggtgtgtgagtttatccatgaacatctg
gaacagccgctgctgctgggtgaactggcggcgcaggccgggctcagcgaatttcacttt
gcccgcatgtttaaacacgataccggcctggcgccgcaccaatacgtgatgcgcgcgcgg
ctgcagcgggcggcgcacctgctgcgtcacggcgtactgccgataacgcagatcgcgctg
gccagcggtttcagctccgccagccacttcagcaaccgcttcaagacgtactacggcatg
acgccgcagcaaatgcgtcagggaaacgcaccggcctga
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