Serratia rubidaea: AXX16_3394
Help
Entry
AXX16_3394 CDS
T04417
Name
(GenBank) putative tonB-dependent receptor yncD precursor
KO
K02014
iron complex outermembrane recepter protein
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srz02000
]
AXX16_3394
Transporters [BR:
srz02000
]
Other transporters
Pores ion channels [TC:
1
]
AXX16_3394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AML59086
LinkDB
All DBs
Position
complement(3649402..3651591)
Genome browser
AA seq
729 aa
AA seq
DB search
MLRLPSIFNGINFMKPISGNTCAAAVALLPVLWPAIAGAAPAADDEATVVVTAKRSGLSE
LSTPAAVSVVNGEQLRDAKPQVNLSESLGVVPGLQVQNRQNYAQDLQLSVRGFGARSTYG
VRGVRIYVDGIPATMPDGQGQTSNIDLASADKVEVLRGPFSALYGNASGGVVNVETQTGR
QPNRVEVGMYAGSYGSWRYGVKASGATGDGSQAGDVNYAVSATRFTTEGFRDHSGARKNL
GNAKLGVRLDDASTLTLLFNSVDINADDPGGLTRAEWQDNPRQSPRAEQFNTRKTVSQTQ
GGLHYQRQFGDSDDLSVMMYAGERETTQYQSIPVFVQQRSPQQPGGVIVLARHYQGVDTR
WTHRGAIAAVLYTLTGGLNYETMTEKRKGYENFAEVNGEQQLGVKGNLRRDERNLMWNLD
PYLQTSWQLTPRLTLDAGVRFSTVNFDSNDHFITAGNGDDSGNARYHQWLPAGALRYALA
DGWNIYAAAGRGFETPTINELSYRPDGSAGMNFDLQPAVSDTLEVGSKTRIGNGLLTAAL
FQTDTRNEIVTANSSNGRSSYKNAGQTRRRGLELALDQQFGEAWRLNMAWTLLDARYRDD
ICGDVACSADKFIGRGNRIPGIARNMGYASLAWAPEQGWYAGAEVRYMSDIQVNDANSAQ
APSYTTVGLNSGYRYPLGNWLVNVFGRVDNLFDRDYVGSVIVNEGNGRFYEPAPGRNWGG
GISVAYSFE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ttgttacgacttccttctatttttaacggcatcaactttatgaaacctatttccgggaat
acctgcgccgccgcggtggcgctgctgcctgttttatggccggcgatcgccggtgcggcg
ccagccgctgacgacgaggcgaccgtggtggtcaccgccaagcgcagcggtctgtctgaa
ctgagtacgccggcggcggtcagcgtagttaacggtgagcagctgcgcgacgccaaaccg
caggtcaacctgtcggagagccttggcgtggtgcccgggctgcaggtgcaaaaccgtcag
aactacgcgcaggatctgcagctgtcggtgcgcggttttggcgcgcgctccacctacggc
gtgcgcggcgtgcggatttatgtcgacggcattcccgccaccatgccggacggacagggg
caaacctcgaatatcgatctggcgtcggcggataaagttgaagtgctgcgcggaccgttt
tccgcgctgtatggcaacgcctcgggcggggtggtcaacgttgaaacgcagaccggccgt
cagccgaaccgcgtagaggtgggcatgtacgccggcagctacggctcctggcgttatggc
gtcaaggccagcggcgccaccggcgacggcagccaggccggcgatgtcaactacgcggtg
tccgcgacgcgctttaccaccgaaggcttccgcgaccacagcggcgcgcgcaagaatctg
ggcaacgccaaactgggcgtgcggctggatgacgccagcaccctgacgctgctgtttaac
agcgtcgatatcaacgccgacgatcccggcggcctgacgcgggcggagtggcaggataac
ccgcgccagtcgccgcgcgccgaacagttcaacacgcgcaagaccgtgtcgcagacccag
ggcggcctgcactatcagcgccagtttggcgacagtgacgatctgagcgtgatgatgtac
gccggcgagcgggaaaccacccagtatcagtcgatcccggtatttgtccaacagcgcagc
ccccagcagcccggcggcgtgattgtgctggcgcgtcattatcagggcgtcgatacgcgc
tggacgcaccgcggcgcgatcgccgccgtgctctataccctgaccggcggcctcaactat
gaaaccatgacggaaaagcgcaagggctatgaaaactttgccgaggtgaacggtgaacag
cagctgggcgtgaagggcaatctgcgccgtgacgagcgcaacctgatgtggaaccttgac
ccgtatctgcaaacttcctggcagctgacgccgcgcctgacgctggacgccggcgtgcgc
ttcagcaccgtcaattttgactccaacgaccactttattaccgccggcaacggcgacgac
agcggcaacgcccgctatcaccagtggctgcctgccggcgcgctgcgctatgcgctggcg
gacggctggaacatctacgccgccgccggacgcggctttgagacgccgaccatcaacgaa
ctctcttaccggccggacggcagcgccggcatgaacttcgatctgcagccggccgtcagc
gatacgctggaggtgggcagtaagacgcgcatcggcaacgggctgctgaccgcggcgctg
ttccagaccgacacccgcaatgagattgtcaccgccaacagcagcaacgggcgcagcagc
tataaaaacgccggacagacgcggcgtcgcggcctggagctggcgctggatcagcagttt
ggcgaggcgtggcggttaaatatggcttggacgctgctggacgcgcgctatcgcgacgat
atttgcggcgacgttgcctgttcagcggataagtttatcggccgcggcaaccgcattccg
ggcatcgcccgcaatatgggctacgcctcgctggcgtgggcgccggagcagggctggtat
gccggcgccgaggtgcgctatatgagcgatattcaggtcaatgacgccaacagcgcccag
gcgccgtcttacaccaccgtcgggctgaacagcggctaccgctatccgctgggcaactgg
ctggtcaacgtttttggccgggttgataacctgtttgaccgcgattacgtgggatcggtg
attgttaatgagggcaacgggcgtttctatgagccggcgccgggacgtaattggggcggc
ggcatcagcgtagcctattcgttcgaataa
DBGET
integrated database retrieval system
