Serratia rubidaea: AXX16_3925
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Entry
AXX16_3925 CDS
T04417
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srz03400
]
AXX16_3925
Enzymes [BR:
srz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AXX16_3925
DNA repair and recombination proteins [BR:
srz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AXX16_3925
Prokaryotic type
AXX16_3925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CON_HrpB
Motif
Other DBs
NCBI-ProteinID:
AML59614
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All DBs
Position
complement(4227918..4229348)
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AA seq
476 aa
AA seq
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MTTHLVWLRNDLRITDNKALHAACCDPQAQVVALFIATPQQWRRHEMAPRQAAFIYANLL
QLRSQLAQRGIPLLVQQCDDFAAAARWLADYCRATGVDALFYNRQYELNERRRDRQVENA
LAETLTCHAFDDALLLPPGSVQTGSGEMYQVFTPFRKAFLQRLLSADVRSLPAPSVRAGG
AIAEPAAPEPFAYPDAEWDAAFPPGEEHALRRLRAFCREQVEDYRQRRDFPALDATSGLS
PYLALGVLSPRQCFNRLRLTCPDLLTQPESGAFTWLNELIWREFYRHLLVAHPALCRHRP
FIGWTDAVRWNPDAEALQAWQQGRTGYPIVDAAMRQLNHTGWMHNRLRMIVASFLVKDLL
IDWRAGERYFMRQLLDGDFAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGAFIR
KWLPELADVPDNELHHPHRWAEQQGVALAYPPPIVDHRQARLTTLAAFEAAKRGGE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctggtctggctgcgcaacgatctgcgcattacggacaataaggcgctg
cacgccgcctgctgcgatccgcaggcgcaggtggtggcgctgtttatcgccacgccgcag
cagtggcgacggcatgagatggcgccgcgtcaggcggcgtttatctacgccaacctgctg
cagctgcggtcgcagctggcgcagcgcggtattccgctgctggtgcagcagtgtgatgac
tttgccgccgcggcgcgctggctggccgactattgccgcgccaccggcgtcgacgcgctg
ttttacaaccggcagtatgaactgaatgagcggcggcgtgaccggcaggttgaaaacgca
ctggcggagacgctgacctgccacgcgtttgatgacgcgttgctgctgccgcccggcagc
gtgcagaccggcagcggcgagatgtatcaggtctttacgccgtttcgtaaggcgttttta
cagcgtctgctcagtgcggatgtgcgctccctgccggcgccgtcggtgcgggcgggcggc
gcgattgccgagccggctgcgccggagccgtttgcgtaccccgatgccgaatgggatgcg
gcatttccgccgggagaggagcacgccctgcgccggctgcgcgccttctgccgcgagcag
gtcgaggattaccggcagcggcgcgattttccggcgctggacgccaccagcggcctgtcg
ccgtatctggccctgggggtgttatcaccgcgtcagtgcttcaaccggctgcggctcacc
tgccctgacttgctgacgcagccggagagcggcgcatttacctggctgaatgagttaatc
tggcgtgagttttaccgccatctgctggtggctcatccggcgttgtgccgtcaccgcccg
tttatcggctggacggacgccgtccgctggaatccggacgccgaggcgctgcaggcctgg
cagcaggggcgcaccggctacccgattgttgatgcggccatgcggcagctgaaccacacc
ggatggatgcataaccgcctgcggatgatcgtcgccagttttctggtgaaggatctcctg
atcgactggcgcgccggcgagcgctactttatgcgccagctgctggatggcgactttgcc
gccaacaatggcggctggcagtgggcggcgtcgaccggcaccgatgcggcgccttacttc
cgcatcttcaacccgacaacgcagggcgaacgttttgatccgcaaggcgcttttatccgt
aaatggttgcccgaactggcggatgtaccggacaatgagcttcatcatccccatcgctgg
gcggaacaacagggcgtggcgctggcgtatccgccgccgatcgtcgaccaccgccaggcg
cggctgacgacgctggcggcgtttgaggcggcgaaacgcgggggagagtaa
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