Serratia rubidaea: AXX16_3985
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Entry
AXX16_3985 CDS
T04417
Name
(GenBank) Penicillin-binding protein 2 (PBP-2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
srz
Serratia rubidaea
Pathway
srz00550
Peptidoglycan biosynthesis
srz01100
Metabolic pathways
srz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXX16_3985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AXX16_3985
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
AXX16_3985
Enzymes [BR:
srz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AXX16_3985
Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AXX16_3985
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AML59668
UniProt:
A0A140F053
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All DBs
Position
4286911..4288806
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AA seq
631 aa
AA seq
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MKIERNPFRDYSAESALFVRRALVAFLVILVLTCILIANMYNLQIVRFEDYRTRSNENRI
KLVPIPPSRGIIYDRNGTPLALNRTIYQLELMPEKVDNLKATLQALRPVVDLTDDDITNF
EKERKRSRRFVSIPVKTALTEVQVARFAVNQFRFPGVEVKGYQRRYYPYGSALTHVIGYV
SKINDRDVARLNKEEKLANYAATHDIGKLGIERYYEDTLHGKTGYEEVEVNNRGRVIRQL
HEQQPSAGQDVYLTLDLNLQRYIEQLLVGSRAAVVVSDPRTGGILAMVSNPSYDPNMFVD
GISNKEYQGLLNDPNRPLINRATQGVYPPASTVKPYIAVSALSAGVVTKNTIVFDPGWWQ
LPGSEKRYRDWKKWGHGRLNVTKALEESADTYFYQVAYDMGIDRLSSWLTKFGYGQYTGV
DLSEERSGLMPTREWKLKRYKKPWYQGDTIPVGIGQGYWTATPLQMAKALNILINDGVVK
TPHLLHSKKINGSLVPFRQEEQTQIGDIHSGFWEIAKDGMYGVANRANGTAHKFFASAPY
KIAAKSGTAQVFGYETYNAHKLAEHLRDHKLMTAFAPYDNPTVSVAIILENGGAGPAVGT
ITRQILDHILLGDNNTQLPDAPPAAPGSEGD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgaacgtaacccttttcgcgactattcggctgaatcagccctgtttgtacgc
cgcgccctggtggcgtttttggtcattctggtgctgacctgcatcctgattgccaatatg
tataatttgcaaattgtccgcttcgaggattaccgcacccgctctaacgaaaaccgcatc
aagctggtgccgatcccgcccagccgcggcattatttacgatcgcaacggcacgccgttg
gcgctcaaccgcaccatctatcagctcgagctgatgccggaaaaagtcgataacctgaaa
gccacgctgcaggcgctgcgtccggtggtcgatctgaccgatgacgacatcaccaatttt
gaaaaagagcgtaaacgctcgcgtcgcttcgtctctattccggtgaagaccgcgctgacc
gaagtccaggtcgcgcgctttgccgtaaatcagttccgcttccccggcgttgaggtcaaa
ggctatcagcgccgctactacccgtacggctccgccctgacccacgtgatcggctatgtg
tcgaaaatcaacgaccgcgacgtcgcacgcctgaacaaagaagagaaactggccaactac
gccgccacccatgatatcggcaagctgggcattgagcgctattacgaagatacgctgcac
ggcaaaaccggctatgaagaggtcgaagtcaacaaccgcggccgggtgatccgccagctg
cacgagcagcagccctccgccggccaggatgtttacctgacgctggatctcaacctgcag
cgctatatcgagcagttgctggtcggcagccgcgccgccgtggtggtcagcgatccgcgc
accggcgggatcctggcgatggtctccaaccccagctacgacccgaacatgtttgtcgac
gggatttccaacaaggaatatcagggcctgctgaacgacccgaaccggccgctgatcaac
cgcgccacccagggcgtctatccgccggcgtccacggtgaaaccctatatcgccgtctcc
gcgctgagcgccggcgtggtcaccaaaaacaccatcgtgtttgacccgggctggtggcag
ctgccggggtcggaaaaacgctaccgcgactggaaaaagtggggccatggccgcctgaac
gtcaccaaggcgctggaagaatccgccgatacctatttctatcaggtcgcttacgatatg
ggcattgaccgcctgtccagctggctgacaaaattcggctacggccaatataccggcgtc
gacctgtccgaagagcgctccggcctgatgccgacccgcgaatggaagctcaaacgctat
aagaagccgtggtatcagggcgacaccatcccggtgggcatcggccagggttactggacc
gcgacgccgctgcagatggcgaaggcgctgaatattctgatcaacgacggcgtggtgaaa
acgccgcacctgctgcacagtaaaaaaataaatggttcactggtgccgttccgccaggaa
gaacagacacaaatcggagatattcactccggcttctgggaaattgccaaagacggtatg
tacggggtcgccaaccgcgccaacggcacggcgcacaagttctttgccagcgctccgtat
aaaatcgcggcgaaatcgggtaccgcgcaggtattcggttacgaaacctataacgcccac
aagcttgcggagcacctgcgcgaccacaagctgatgaccgcattcgccccttatgacaac
ccgacggtgtcggtagcgatcattttggagaacggcggcgccggcccggcggtcggcacc
attacccgccagatcctcgatcatatcctgttgggcgacaacaatacgcaattaccggac
gcgccgccggcggcgcccggctcagaaggtgactaa
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