Serratia rubidaea: AXX16_4136
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Entry
AXX16_4136 CDS
T04417
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srz03400
]
AXX16_4136
DNA repair and recombination proteins [BR:
srz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXX16_4136
Archaeal homologous recombinant proteins
AXX16_4136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF6781
Motif
Other DBs
NCBI-ProteinID:
AML59818
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All DBs
Position
4440962..4442188
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AA seq
408 aa
AA seq
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MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLIAQIEQHQVDALIVAGDLFDTGSPPSYAR
ELYNRFVVELQQTGCQLVVLGGNHDSVATLNESRELLSCLNTTVIANAQPDAGQQIVTLN
RRDGQPGALLCAIPFLRPRDLLTSRAGESGTQKQQALQEAIAGHYQALHQAACAQREALG
LTLPIVATGHLTTVGVTTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKSEH
IRYSGSPIPLSFDELGNAKSVFMVDFADGGLQQVTPLSVPLFQPMQLIKGDLAQIERQLQ
QFADYQGELPVWLDIEVATQDYLSDIQRRIQALADNLPVEVVLLRRSKEQRRQAIEQQDK
ETLNELSVDEVFERRLAQESELEEARRGRMRDMFRQTVNALQDEEPSA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatacacacctctgactggcatttgggtcagtactttttcaccaaaagccgc
gccgccgagcatcaggcatttctgcgctggctgattgcgcagatcgaacagcaccaggtg
gacgcgttgatcgtcgccggcgacctgtttgataccggttcgccgccgagctacgcgcgc
gaactgtacaaccgctttgtggtggaactgcagcagaccggctgccagctggtggtgctg
ggcggcaaccacgactccgtggcgacgctgaatgaatcccgcgagctgctctcctgtctg
aataccaccgtgatcgccaacgcgcagcccgacgccgggcagcagatcgtgacgcttaac
cgacgcgacggccagcccggcgcgctgctgtgcgctatcccgttcctgcgtccgcgcgat
ttgctgaccagccgcgccggcgaatccggcacgcaaaagcagcaggcgctgcaggaagcc
atcgccggccattatcaggcgctgcatcaggcggcctgcgcgcagcgcgaggcgctcggc
ctgacgctgccgatcgtcgccaccggccacctgaccaccgtcggcgtcaccacctcagat
tcggtgcgcgatatctatatcggcacgctggacgcctttccggcgcaggcctttccaccg
gcggactatattgccttggggcatatccaccgggcgcagcaggtagccaaaagcgagcat
atccgctacagcggctcgccgatcccgctcagctttgacgagctgggcaacgccaaaagc
gtgtttatggtcgacttcgccgacggtgggctgcagcaggtcaccccgctgtcggtcccg
ctcttccagccgatgcagctgatcaagggcgatctggcgcagatcgaacggcagctgcag
cagtttgccgattatcagggcgagctgccggtatggctggatattgaggtggcgacgcag
gattacctcagcgatattcagcgccgcattcaggcgctggcggataatctgccggtggaa
gtggtgctgctgcggcgcagcaaggagcagcgccgtcaggccattgagcagcaggataaa
gagacgctgaacgaactgagcgtggacgaggtgtttgaacgccggctggcgcaggaaagc
gaactggaagaggcgcggcgcggccggatgcgcgacatgttccgccagacggtgaacgcg
ctgcaggatgaggagccatcggcatga
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