Serratia rubidaea: AXX16_4178
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Entry
AXX16_4178 CDS
T04417
Name
(GenBank) Beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
srz
Serratia rubidaea
Pathway
srz00052
Galactose metabolism
srz00511
Other glycan degradation
srz00600
Sphingolipid metabolism
srz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
AXX16_4178
09103 Lipid metabolism
00600 Sphingolipid metabolism
AXX16_4178
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AXX16_4178
Enzymes [BR:
srz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
AXX16_4178
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
AML59860
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All DBs
Position
complement(4483573..4486656)
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AA seq
1027 aa
AA seq
DB search
MTLNTDSLAAVLARRDWENPGVTQLNRLEAHPPFYSWRNADAARSDQHSDRLRSLNGDWK
FNWFAAPEAVPESWRLSDLPDADTVTVPSNWQMGGYDAPIYSNITYPFPVDPPRVPADNP
TGCYSLTFSLDKRAVSGEQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSDFLQQ
GENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPAVCIRDLHIATRFNADFSRAQ
LEAEVCMAGEVSDDLRVTVQLWRDNALSAEASAPFGSALIDERGAYAERTTLRLEVEHPA
LWSAETPQLYRALVLLQRADGTLIEAEACDVGFRQVSIENGLLLLNGKPLLIRGTNRHEH
HPQRGQVMDEETMLQDILLMKQHNFNAVRCSHYPNHPLWYRLCDRYGLYVVDEANIETHG
MTPMSRLSDDPHWLPAMSQRVTRMVQRDRNHPSIIIWSLGNESGHGANHDALYRWLKSAD
PSRPVQYEGGGANSAATDIICPMYARVDQDQPFPVAPKWSIKKWLSMPGEQRPLILCEYA
HAMGNSLGGYAKYWQAFRQYPRLQGGFVWDWVDQSLIKHDADGTPWSAYGGDFGDTPNDR
QFCMNGLLFADRTPHPSLYEAKHAQQLFQFTLLPGEERRIEVTSEYLFRHSDNEVLHWSI
AQDGRPLAAGEAVLDIAPQGRQTITLPAVPLPETAGQLWLTVRVVQPQATAWSPAGHLSA
WQQWALEEKLDAQPVVHAGEAPQLSSSEAQFSIALGRQRWAFCRRQGVLTQYWMDEEPQL
LSPLLDQFTRAPLDNDIGISEVTRIDPNAWVERWKAAGHYRAEAVLLQCEAEALSRAVLI
TTEHAWKHQGETLFISRKTYRIDGLGEMQITAEVEIANGTPPPARIGLSCRLAQRAPRVS
WLGLGPHENYPDRLSSACFDRWEQPLEAMYTPYVFPCENGLRCGTRELQYGAHRWRGNFQ
FNISRYGQRQLMETSHRHLLQPEEGVWLNIDGFHMGIGGDDSWSPSVAPEYLLSAGRYRY
QLVWGQQ
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgactctgaatacggactcactcgctgcggtactggcgcgccgcgactgggaaaatccc
ggcgtgacgcagcttaaccgtctggaggcgcacccgcctttttacagctggcgcaatgcc
gacgcggcgcgcagcgaccagcattccgatcggctgcgcagcctgaacggcgactggaaa
tttaactggtttgccgcgccggaggcggtgccggaaagctggcgcctgagcgatctgccc
gatgccgacaccgtaaccgtcccctccaactggcagatgggcggttacgatgcgccgatt
tactccaacatcacctatccgttcccggtcgatccgccgcgcgtgccggccgataacccg
acgggctgttattcgctcacatttagtctggacaagcgggcggtaagcggcgagcagacc
cgcatcatctttgacggcgttaactccgcatttcacctgtggtgcaacgggcgctgggtg
ggctacggccaggacagccggctgccgtccgaatttgatctcagtgattttctgcagcag
ggggaaaaccgcctggcggtgatggtgctgcgctggagcgacggcagctatctggaagat
caggatatgtggcggatgagcggtattttccgcgatgtgtccctgctgcataaaccggcg
gtatgcatccgcgatctgcatatcgctacccgctttaatgctgatttcagccgcgcgcag
ctggaggccgaggtctgcatggcgggggaagtgagtgatgacttacgcgtcaccgtgcag
ctgtggcgggacaacgccctgagcgcggaggccagcgcgcctttcggcagcgcgcttatc
gatgagcgcggcgcctatgccgagcgcaccacgctgcggctggaggtggagcatccggcg
ttgtggagtgcggaaaccccgcagctgtatcgcgcgctggtgctgctgcagcgcgccgac
ggcacgctgattgaggcggaagcctgcgacgtcggcttccgtcaggtgagtattgaaaac
ggtctgctgctgctgaacggcaaaccgctgctgatccgcggtaccaaccgccatgagcat
catccgcagcgcgggcaggtgatggatgaagagaccatgctgcaggacatcctgctgatg
aagcagcataactttaacgcggtgcgctgctcgcactacccgaaccacccgctgtggtac
aggctctgcgatcgctacggcctgtatgtggtggacgaggcgaatatcgaaacgcacggc
atgacgccgatgagccgcctgagcgacgatccgcactggctgccggccatgagccagcgc
gtaacgcggatggtgcagcgcgatcgcaaccacccgagcattattatctggtcgctgggc
aatgagtccggccacggcgccaatcacgacgcgctttaccgctggctgaagtcggccgat
ccgtcgcgcccggtgcagtacgaaggcggcggcgcgaatagcgcggcgaccgatattatc
tgtccgatgtatgcgcgcgtcgatcaggatcagccgtttcccgttgcgccgaagtggtcg
atcaaaaagtggctatcgatgccgggcgagcagcgtccgctgatcctctgtgaatacgcc
catgcgatgggcaacagcctgggcggttacgccaaatactggcaggccttccgtcagtat
ccgcggctgcagggcggctttgtttgggactgggtggatcagtcgctgatcaagcatgac
gcagacggtacgccgtggtcggcgtacggcggcgactttggcgatacgcccaacgatcgc
cagttctgtatgaacgggctgctgtttgcggatcgcacgccgcatccttcgctgtatgag
gccaagcatgcgcagcagctgttccagtttacgctgctgccgggcgaggagcggcggatt
gaggtcaccagcgaatacctgttccgccatagcgataacgaagtgctgcactggtcgatt
gcacaggatggccggccgctggccgcgggagaagcggtgctggacatcgcgccgcaggga
cgtcagacaattaccctgccggcggtgccgctgccggaaacggcggggcagctgtggctg
acggtgcgggtggtgcagccgcaggcgacggcatggtcgccggccgggcatctcagcgcc
tggcagcagtgggcgttggaagaaaaactcgacgcgcagcccgtggtacacgccggcgag
gcgccgcagctctccagcagtgaggcgcagttcagcattgcgctgggcaggcagcgctgg
gcgttctgccgccggcagggcgtgctgacgcagtactggatggatgaagagccgcagctg
cttagcccgctgcttgatcagttcacccgcgcgccgctggataatgatatcggcatcagc
gaggtgacccgcattgatccgaacgcctgggtcgagcgctggaaggccgccggccactac
cgggcggaagccgtgctgctgcagtgcgaggccgaagcgctgtcgcgcgcggtgctgatt
accaccgagcatgcctggaagcatcagggcgaaacgctgtttatcagccgcaaaacctac
cgcattgacggcctcggcgagatgcagataacggcggaggtggagatcgccaacggcacg
ccgccgccggcacgcatcggcctgagctgccggctggcgcagcgggcgccgcgcgtgagc
tggctggggctggggccgcatgaaaactacccggaccgcctgagttccgcctgttttgac
cgctgggagcagccgctggaggcgatgtacaccccgtacgtcttcccgtgtgaaaacggc
ctgcgctgcggcacccgcgagctgcagtatggcgcgcaccgctggcgcggcaacttccag
ttcaacatcagccgttacggccagcggcagctgatggagaccagccatcgccatctgctg
cagccggaggagggcgtctggctgaatattgacggcttccatatggggattggcggcgac
gactcctggagcccttccgtcgcgccggaatacctgctcagcgccgggcgctatcgctac
caactggtctggggccaacaataa
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