Serratia rubidaea: AXX16_4224
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Entry
AXX16_4224 CDS
T04417
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
srz
Serratia rubidaea
Pathway
srz03030
DNA replication
srz03430
Mismatch repair
srz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXX16_4224
03430 Mismatch repair
AXX16_4224
03440 Homologous recombination
AXX16_4224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srz03032
]
AXX16_4224
03400 DNA repair and recombination proteins [BR:
srz03400
]
AXX16_4224
Enzymes [BR:
srz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXX16_4224
DNA replication proteins [BR:
srz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXX16_4224
DNA repair and recombination proteins [BR:
srz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXX16_4224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
AML59904
UniProt:
A0A140F0R5
LinkDB
All DBs
Position
complement(4540058..4540795)
Genome browser
AA seq
245 aa
AA seq
DB search
MITTPTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRHYHVYVKPDRLVDP
EAYGVHGISDEFLADKPTFDQIADEFLDFIRGGELVIHNASFDIGFMDHEFRMLQRNIPN
TDTFCTITDSLMMARRLFPGKRNNLDALCSRYEIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSMAFQMEGDTQQNDSVQEVQRIVRPANAMKVVYASDEELVAHEARLDLVAKKGGGNC
LWRAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgatcactacaccaaccagacaaatcgttcttgataccgaaaccaccggtatgaacaag
ctaggggttcactatgaagggcaccgcatcatcgaaatcggtgcggtagaggtgatcaac
cggcgcctgaccggccgccactatcatgtgtacgtcaaaccggaccggctggtggatccg
gaagcctacggcgtacacggcatcagcgacgaattcctggccgacaagccgaccttcgat
cagattgccgacgagttcctcgactttatccgcggcggtgagcttgtcattcacaacgcg
tcgttcgatatcggctttatggatcacgagttccgcatgctgcagcggaatatcccgaat
accgataccttctgtaccatcaccgatagcctgatgatggcgcgccgcctgttcccgggc
aagcgcaacaacctggatgccctgtgcagccgttacgaaatcgacaacagcaagcgtacg
ctgcacggcgcattgctcgatgccgagatcctggcggaagtctatctggcgatgaccggc
ggccagacctcgatggcattccagatggaaggggacacccagcagaacgactcggtgcag
gaggtgcagcgcatcgtgcgtccggccaatgcgatgaaagtggtgtacgccagcgatgaa
gagctggttgcccacgaggcgcgtctggatctggtggcgaaaaagggcggcggcaactgc
ctgtggcgcgcagaataa
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integrated database retrieval system
