Serratia rubidaea: AXX16_4359
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Entry
AXX16_4359 CDS
T04417
Name
(GenBank) Sugar diacid utilization regulator SdaR
KO
K02647
carbohydrate diacid regulator
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srz03000
]
AXX16_4359
Transcription factors [BR:
srz03000
]
Prokaryotic type
Helix-turn-helix
Other families
AXX16_4359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
Motif
Other DBs
NCBI-ProteinID:
AML60029
LinkDB
All DBs
Position
complement(4673353..4674504)
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AA seq
383 aa
AA seq
DB search
MAEYHLDGKLAQEIVARTMQIIDGNVNVMDARGRIIGSGDRERVGELHEGALLVLSQARV
VDIDEAVARHLHGVRPGINLPLRIDGSIVGVIGLTGNPAQLRQYGELVCMAAEMMLEQAR
LMHLLAQDSRFREELVLNLIRAEALSPALMEWAQRLGIDPEEPRVAAVVEVDSGQLGVDS
AMAELQQLQALLTLPERDNLIAIVSLSEMVVLKPALNGHGRWDAEDHRRRVENLLSRMKE
SSRLRVRVALGNYFTGPGSIARSYRTARTTMAVGKQRMFEQRAYYYQDLMLPVLLDSLRG
GWQADELVRPLARLKSMDGNGLLRRTLSAWFLNNVQPSATAKALYIHRNTLEYRLNRISE
LTGLNLSSFDARLLLYIGLQLDE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcggaataccatcttgacggcaagctggcgcaggaaatcgtggcgcgcaccatgcaa
atcattgacggcaacgtcaatgtgatggacgcgcgcggcagaatcatcggcagcggcgac
cgtgaacgggtcggcgagctgcacgaaggggcgctgctggtactgtcgcaggcccgggtg
gtggatatcgatgaggccgtggcccgccatctgcacggcgtgcggccgggcatcaatctg
ccgctgcgcatcgacggcagcatcgtcggggttatcggcctgaccggcaatccggcgcag
ctgcgccaatatggcgaactggtgtgtatggcggccgaaatgatgctggagcaggcgcgg
ctgatgcacctgttggcgcaggacagccgcttccgcgaagagttggtgctgaacctgatc
cgcgcggaggcgctgtcgccggcgcttatggagtgggcgcagcggctgggcatcgatccg
gaggagccgcgcgtggcggcggtggttgaggtggacagcgggcagctgggcgtcgacagc
gcgatggcggaactgcagcagctgcaggcgctgctgacgctgccggagcgcgacaacctg
atcgccatcgtctcgctcagcgaaatggtggtgctgaagccggcgcttaacggccacggc
cgctgggacgccgaagaccaccgccgccgggtggaaaacctgctgtcgcgcatgaaagag
agcagccgcctgcgggtgcgggtggcgctgggcaattactttaccgggccgggcagtatc
gcccgctcctaccgcaccgcgcgcaccaccatggcggtgggcaagcagcgcatgttcgag
cagcgcgcctactactaccaggatttgatgctgccggtgctgctggacagcctgcgcggc
ggctggcaggcggacgagctggtcaggccgctggcgcgcctgaagtcgatggacggcaac
ggcctgctgcggcgcaccctcagcgcctggtttttgaataacgtgcagccgagcgccacc
gccaaggcgctgtacattcaccgcaacacgctggaataccgcctgaaccgcatctccgaa
ctgaccggcctcaacctgtcgagctttgacgcccgcttactgctgtatatcggcctgcag
ctggacgaatag
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integrated database retrieval system
