Serratia rubidaea: AXX16_4418
Help
Entry
AXX16_4418 CDS
T04417
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srz03021
]
AXX16_4418
Transcription machinery [BR:
srz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AXX16_4418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
COG2_N
Motif
Other DBs
NCBI-ProteinID:
AML60088
LinkDB
All DBs
Position
4742225..4745131
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMITLLFPATGENRLYARNDSPITRVMFNPGDT
ITSHEGWQLQVEEVKEDNGLLTYIGTRTDTQESGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYLSEQYRLPFAGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMMRRFNLYFSLFDDSRYAEAKL
DSSNPFETEQLVICSLDFVRRNKQRLEELSDAQWDLLVVDEAHHLAWSEDAPSREYQVIE
QLAEHTPGVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVTEQQKYRPVADAVTLLL
SGEHLANDKLNLLGELIEEQDIEPLLQAANGDGENSEAARQELVTMLMDRHGTSRVLFRN
TRQGVKGFPHRNLHQIKLPLPDQYQTAIKVSGIMGAKKSLEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLIANRHEKVLVICAQATTALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQLHDIQIMVPYLENTAQAVLGRWFHEGLDAFEHTCPTGRTIYDSSYERLIGYLAAPTEQ
AGLDEFIHECRQQHDQLKAQLEQGRDRLLEMHSNGGDKAQALADAIAEQDNDVNLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLIVSGDTGSCAVSLLKNKALPVGTLLVELVYVVEAQAPKHLQLTRFLPPTP
IRMLLDRKGTNLAGQVEFESFNRQLNAVNRHTSSKLVNAVQQDVHAMLQQAESLVEAEAR
TLIEQAKQEADDKLSNELARLEALKAVNPNIRDDEVETLEFNRKQVLANLNDAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttactcttggtcaacgctggatcagcgatacggaaagcgaattaggtctgggt
accgtcgtggcgctggatgcgcgcatgatcaccctgcttttccccgccaccggtgaaaac
cgtctctacgccagaaatgattccccgatcacccgcgtgatgttcaacccgggcgatacc
attaccagccatgaaggctggcagcttcaggtagaggaagtgaaagaggacaacgggctg
ctgacctatatcggcacccgcacggacacgcaggaaagcggcgtggcgatgcgcgaagtg
ctgctggacagcaaactcaccttcagcaaaccgcaggaccgcctgtttgccggtcagatt
gaccgtatggatcgtttcgcgctgcgcttccgcgcgcgcaaatacctcagcgaacagtat
cgcctgccgttcgccggcctgcgcggcatgcgcgccagcctgatcccgcaccagctgcat
atcgcctatgaagtcggccagcgccatgcgccgcgcgtattgctggcggatgaagtcggc
ctgggcaaaaccatcgaagccggcatgattatccaccagcagctgctggccggccgcgcc
gaacgcgtgctgatcgtggtgccggaaacgctgcagcatcagtggctggtggagatgatg
cgccgcttcaacctgtacttctcgctgttcgacgacagccgctatgccgaagccaagctc
gacagcagcaacccgttcgagaccgaacagctggtgatctgctcgctggactttgtgcgc
cgcaacaaacagcgcctggaagagctgtccgacgcccagtgggatctgctggtggtcgat
gaagcccaccacctggcctggagcgaagacgccccgagccgtgaataccaggtaatcgaa
cagctggcggaacacacccccggcgtgctgttgctgacggcgacgccggaacagctgggg
cagcagagccacttcgcccgtctgcgcctgctggatccgaaccgcttccacgactatcag
gagttcgtcaccgagcagcaaaaataccggccggtagccgatgccgtcaccctgctgctg
agcggtgagcatctggcgaacgacaagctgaacctgctgggtgaactgatcgaagaacag
gatatcgaaccgctgctgcaagcggccaatggcgacggcgaaaacagcgaagccgcacgc
caggagttggtcaccatgctgatggaccgccacggcaccagccgcgtgctgttccgcaac
acccgtcagggcgttaaaggcttcccgcaccgtaacctgcaccagatcaagctgccgctg
cccgatcagtatcagacggcgatcaaggtgtccggcataatgggggcgaaaaagagcctg
gaggcgcgcgcgcgcgacatgctgtatccggagcagatctatcaggagttcgagggcgaa
aacgccacctggtggaacttcgacccgcgcgtcgagtggctgctgaactacctgatcgcc
aaccgtcatgaaaaagtgctggtgatctgcgcccaggcgaccaccgccctgcagctggaa
caggtgctgcgcgagcgggaagccatccgcgccgcggtattccacgaagggctaagcatc
atcgagcgcgaccgcgcagccgcctacttcgcctccgaagaggatggcgcccaggtgctg
ctgtgttctgaaatcggctccgaagggcgcaacttccagttcgccagccagctggtgatg
ttcgacctgccgttcaacccggatctgctggagcagcgcatcggccgtctggaccgcatc
ggtcagctgcacgatatccagatcatggtgccgtatctggaaaacaccgcgcaggcggtg
ctgggccgctggttccatgagggactcgacgcctttgagcacacctgcccgaccggccgc
accatctacgacagcagctatgagcgcctgatcggctatctggccgcgccgaccgagcag
gccgggctggatgaatttatccacgagtgccgtcaacaacacgatcagctgaaagcccag
ctggaacagggtcgcgaccgcctgctggagatgcactccaacggcggcgacaaggcgcag
gcgctggccgacgccatcgctgagcaggacaacgacgtcaatctggtgagctttgcgctc
aacctgtttgatattgtcggcatcaatcaggaagaccgcagcgataacctgatcgtgctg
acgccgtccgaccatatgctggtgccggatttcccgggcctgccgcaggacggctgcacc
gtcaccttcgaccgtgagcaggcgctgtcgcgcgaagatgcgcagttcgtcagctgggag
cacccgattatccgcaacgggctggatctgatcgtctccggcgataccggcagctgcgcg
gtatcgctgctgaagaacaaggcgctgccggtcggcaccctgctggtggagctggtgtac
gtggtcgaggcgcaggcgccgaagcacctgcagctgacgcgcttcctgccgccaacgcca
atccgcatgctgctggaccgcaagggcaccaacctggcgggacaggtggagtttgaaagc
tttaaccgccagctgaacgccgtgaaccgccacacctccagcaagctggtcaacgccgtc
cagcaggacgtgcacgccatgctgcagcaggcggaaagcctggtagaggccgaagcgcgg
acgctgatcgagcaggccaagcaggaagccgacgacaagctgagcaacgaactggcgcgc
ctggaagcgctgaaagcggtcaacccgaacatccgcgacgacgaagtcgaaacgctggag
ttcaaccgcaaacaggtgctggcgaacctgaacgacgccggctggcgtctggacgccatt
cgtctggtggttgtcacccaccagtaa
DBGET
integrated database retrieval system
