Serratia rubidaea: AXX16_4436
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Entry
AXX16_4436 CDS
T04417
Name
(GenBank) putative sigma-54-dependent transcriptional regulator YgeV
Organism
srz
Serratia rubidaea
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GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
Mg_chelatase
AAA_5
AAA_16
PAS
AAA
GAF
TIP49
AAA_7
AAA_19
PAS_7
AAA_2
HTH_7
AAA_22
PAS_8
DUF815
MCM
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AML60107
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Position
4767829..4769595
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AA seq
588 aa
AA seq
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MNIAKPESLLMQIQPTILKFTKMLASVLQLEVEIVDAALTRVAGTGPYNHALGRNLNTNS
HLLRYVIDNKREKVVIQSHQDPLCEQCNHRESCTEQAFLGIPIIVNQQCIGVISLVAFTP
VQQEKIKNNIQMLSDYIRHISNIFVGKLIESSPAKDSFNNVLLTLIENMDQGVLVINKEK
IITLSNSAAQKQLDIEAESIGHSEIHITPLTQLQNYNCGHVQYIVKIGQRQLLITGQLHS
VQEHSLFLMAFHQSHMSLDAGFLTTEPDIDQLIGNSKPMQRLKQLITRIAPGSSSVLIVG
ESGTGKEVVARAIHRLSLRSDKPFIAINCAAIPDQLLESELFGYVKGAFTGASNSGKSGL
IQSANGGTLFLDEIGDMPLMLQAKLLRAIESREVLPIGASKPVSVDIRIVSATNQNLSAY
IAEGKFREDLYYRLNVIPITLAPLRERQGDIELLVNFFLNVHTRRMGCAYPGISPDVLQI
LRYYRWPGNVRELSNLMEYLINIVPNGEVIDSSLLPPNLISHAQHVMPSLKADNPAEEQE
ANASLESMEKQLIEETLLRYPNKKQAAEELGIGVATLYRKIKKYQLKN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgccaagcccgaatcgctattaatgcagatccagcccaccatcttgaagttc
accaaaatgctcgccagcgttttacagctcgaagtcgagattgtcgatgccgcactcacc
cgcgtcgccggtaccggtccttataaccacgcgctgggtcggaatttgaataccaacagt
cacctgctgcgctacgtaatagacaacaagcgggaaaaggtggtgatccagtcgcatcag
gatccgttgtgcgaacagtgtaaccatcgtgaaagctgtactgaacaggcctttctcggt
attcctatcatcgtcaaccagcagtgcatcggcgttatcagtctggtggcgtttacgccg
gtgcagcaggagaaaataaagaacaatatccaaatgctttctgattacatccgccacatc
tccaatattttcgtggggaagctaattgaatcatcacctgcaaaagatagtttcaataat
gtattacttacgttaatagaaaatatggaccaaggtgtattggttataaataaagaaaaa
atcatcactctaagtaattcggctgcgcaaaagcagttggatatcgaggcagagtcgatc
ggccatagcgaaattcacattacgccgttaactcagttgcaaaactataactgtggtcat
gtgcaatacatcgtaaaaataggacagcgtcagttattaatcaccggtcagttgcacagc
gtgcaagagcatagcctattcctgatggcattccatcagtcgcatatgtctctggatgcc
ggttttctcaccacagagccggatattgatcagttgatcggcaattccaaaccgatgcaa
cgcctgaaacaattgatcacccgcattgcccccggcagttccagcgttctcatcgtcggc
gaaagcggtacgggtaaagaggtggtcgcccgcgcgatccaccgcttaagtctgcgcagt
gacaaaccgtttatcgctattaactgcgccgccatccccgaccagttgttggagagcgaa
ctgttcggctacgtgaagggcgcatttaccggtgcatccaatagcggtaagagcggcttg
atacagtcagccaacggcggcacgctattcctggacgagattggcgatatgccactgatg
ctacaggcaaaactgctacgcgctatcgaatcgcgggaagtcctgccgataggcgccagt
aaaccggtatcggtcgatatccgaattgtttccgcaaccaaccagaatctttcggcgtat
atcgccgaggggaaatttcgtgaggatctctactatcgccttaacgtgatccccatcacg
ctggcgccgctgcgtgaacggcagggcgatatcgagttattggtcaattttttcctcaat
gtacatacgcgccgtatgggctgcgcctatcccggtatctcaccggatgtcctgcaaata
ttgcggtactatcgttggccgggcaacgtgcgcgaactcagcaatctgatggagtatctg
atcaatatcgttcccaacggagaggtgatcgacagcagcctgctgccgccaaacctgatt
tcacatgcacagcatgttatgccctctctaaaggcagataatcctgccgaagagcaggaa
gctaacgccagcctggagagtatggaaaaacagctgatagaagaaacgctactgcgctac
ccgaacaagaaacaggcggcggaagagttaggtatcggcgtggctacgctgtatcgcaag
atcaagaaatatcagctgaaaaactag
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