| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase I, beta chain (160 kDa subunit), putative
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| KO |
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| Organism |
ssa Streptococcus sanguinis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ssa00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSA_0177 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ssa03021]
SSA_0177 (rpoC)
03400 DNA repair and recombination proteins [BR:ssa03400]
SSA_0177 (rpoC)
Enzymes [BR:ssa01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSA_0177 (rpoC)
Transcription machinery [BR:ssa03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSA_0177 (rpoC)
DNA repair and recombination proteins [BR:ssa03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSA_0177 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
178545..182192
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| AA seq |
1215 aa
MVDVNRFKSMQITLASPNKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGAGSFVAKMGAEAIQDLL
KQVDLEAEIAVLKEELKTASGQKRIKAVRRLDVLDAFYKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIVQNVKAAKRLVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMIFKDMDEAVMALRNGYVHLHTRVGI
ATDSLNKPWTEDQKHKILITTVGKILFNAIMPEELPYLQEPTNANLTEGVPAKYFLESGQ
DIKEVIEQLEINVPFKKKNLGNIIAEIFKRFRTTETSALLDRLKNLGYHHSTLAGLTVGI
ADIPVVEDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLVANQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLITSITEGKEMIESLE
ERLNGRYTKKTVKHPETGAVIIGPNELITEDKAREIVNAGVEEVTIRSVFTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGEAVITEVKGEVTAIEEDASTRTKKVFVKGQTGEGEYVVPFTARMKVEVGDQV
SRGAALTEGSIQPKHLLAVRDVLSVETYLLAEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RVMDPGDTDLLMGTLMDITDFTDANRDVVISGGVPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAVNEVEIIDEVT
ELPDGFETEENIVLK |
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| NT seq |
3648 nt +upstreamnt +downstreamnt
gtggttgatgtaaatcgttttaaaagtatgcaaatcaccctagcttctccaaataaggtc
cgttcatggtcttatggggaagtgaagaaacctgaaacaatcaattaccgaaccctgaaa
ccagaacgcgaaggcctttttgacgaagtgatcttcggtccaaccaaggactgggaatgt
gcctgtggtaagtacaaacggattcgttacaaaggaatcgtctgtgaccgctgtggtgtt
gaagtaacccgtgccaaggttcgccgtgagcgtatgggccacatcgaattgaaggctcct
gtttcacatatttggtactttaaaggaattccaagccgcatggggctcactttggatatg
agcccacgtgccctggaagaagtcatttattttgcggcttatgtggtgattgatcctaag
gatacaccgctagagcacaagtcaatcatgacggagcgtgagtatcgtgaacgtttacgc
gagtatggtgctggctcatttgtagccaaaatgggagcagaagctattcaagacctcttg
aaacaagtggacttggaagctgaaattgctgtcctcaaagaagaattgaaaactgcttca
ggtcaaaaacggatcaaggctgtccgtcgcttggatgttttggatgccttctacaagtct
ggcaataagccagaatggatggttcttaacatcctgccggttattccgccagatttgcgc
ccgatggttcagctggatggtggccgttttgcggcttctgacctcaatgatctctatcgc
cgggttatcaaccggaacaaccgcttggctcgtttgctggaactcaatgcacctggtatc
atcgttcaaaatgagaagcggatgcttcaagaagcggtcgatgctttgattgataacggt
cgccgtggccgtccgattacaggaccaggcagccgtccgcttaagtccttgagccacatg
ctcaaaggtaaacaaggtcgtttccgtcaaaacttgctgggtaaacgggttgacttctca
ggtcgttccgttatcgccgttggtcctacactgaaaatgtatcaatgtggggtgccgcgt
gaaatggcgattgagctcttcaaaccgtttgttatgcgggaaatcgttgcccgcgacatc
gtgcagaacgtaaaagctgccaaacgcttggtagagcgtggagatgaacgcatctgggat
attctggaagaagtcatcaaggaacacccagtgctccttaaccgcgcaccgacccttcac
cgtttggggattcaggctttcgagccagttctgattgacggtaaagctttacgtttgcat
ccgctggtctgtgaagcctacaatgccgactttgacggtgaccagatggctatccacgta
ccattgtcagaggaagcgcaagctgaagctcgtatcctcatgctggctgctgagcacatc
ttgaatccaaaagacggaaaaccagtcgtaacaccgtctcaggatatggtcttggggaac
tactacctgaccatggaagaggctggccgcgaaggtgaaggcatgatcttcaaggatatg
gatgaagcggttatggccctccgcaacggctatgttcacttgcatactcgtgttggtatt
gcaacagacagtctcaataagccttggacagaagaccagaagcataagattttgatcaca
actgttggtaaaattctctttaacgcgattatgcctgaggaattgccttacttgcaagag
ccaaccaatgctaacttgacagaaggtgtgccagctaagtacttcttggagtcaggacaa
gacatcaaggaagtcattgaacagcttgagatcaatgttccgtttaagaagaaaaatctt
ggtaacatcatcgcagaaatcttcaaacgattccgtacaacagaaacatctgctcttctt
gaccgcttgaagaacttgggttatcaccattctactttggctggtctgacagtaggtatc
gctgatatcccagttgtcgaagacaaggctgagattattgaagaatcccataagcgtgtt
gaacaaattactaaacaattccgccgtggtatgatcactgacgatgaacgctacaatgca
gttactgctgagtggcgggcagctcgtgagaaattggaaaaacgtttggttgctaaccag
gatcctaagaaccctatcgttatgatgatggactctggagcccggggtaacatctctaac
ttctcccagttggccggtatgcgtggtctgatggctgcgccaaatggacgtatcatggaa
ttgccaatcttgtctaacttccgtgaaggtctgtctgttctggaaatgttcttctcaact
cacggtgctcgtaagggtatgaccgatacggcccttaagacagccgactcgggttacctg
actcgtcgtttggttgacgttgcccaagatgtgattatccgtgaagacgactgtggtaca
gatcgtggacttcttatcacttctatcacagaaggcaaggagatgatcgagtctctggaa
gagcgtctcaatggtcgttacactaagaaaacagttaaacatccagaaactggtgcggtc
attattggtccaaatgaattgatcacagaagacaaggcgcgtgaaatcgttaatgctggt
gttgaagaagtgacaatccgctccgtctttacatgtaacacccgccacggtgtctgccgt
cactgttacggtatcaacttggcaacgggtgatgcagttgaagtcggtgaagcagtcgga
accatcgctgcccagtctatcggggagcctggtacacagctgaccatgcgtaccttccac
acgggtggtgttgcctctaataccgatatcacacaaggtcttcctcgtgtccaagaaatc
tttgaagcccgcaatccgaaaggggaagcagtcatcactgaagtcaagggtgaggttact
gctatcgaagaagatgcatctactcgtaccaagaaggtctttgttaaaggccaaactggc
gaaggtgagtatgtggtaccatttacagcccgtatgaaggttgaagtgggtgaccaagtt
tctcgtggtgctgccttgactgaaggttcaatccagcctaagcacttgctggctgtccgc
gatgtcttgtctgttgaaacttatctgcttgctgaggtacaaaaagtttaccgcagccaa
ggggtagaaatcggcgacaaacatatcgaggtaatggttcgtcagatgattcgcaaggtg
cgcgtcatggatccaggtgatacagatctcctcatgggaactctcatggatattacagac
tttacagatgctaatcgtgatgtggttatctcaggcggtgtgcctgcgacagctcgtcca
gtcctcatgggaatcaccaaagcttcccttgagacaaacagcttcttgtctgcagcttcc
ttccaggaaacaactcgtgtcctgacagatgctgctatccgtggtaagaaagaccatctg
ctcggactcaaggaaaatgttatcatcggtaagattatcccggccggtacaggtatggcc
cgctaccgcaatctggagcctcaggctgtcaatgaagttgaaattattgacgaagtgaca
gaactgccagatggatttgaaactgaagaaaatattgttcttaaataa |
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