Streptococcus sanguinis: SSA_0825
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Entry
SSA_0825 CDS
T00473
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32), putative
KO
K03086
RNA polymerase primary sigma factor
Organism
ssa
Streptococcus sanguinis
Pathway
ssa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SSA_0825 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssa03021
]
SSA_0825 (rpoD)
Transcription machinery [BR:
ssa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SSA_0825 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
ABN44254
UniProt:
A3CM49
LinkDB
All DBs
Position
804004..805116
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AA seq
370 aa
AA seq
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MATKQKEVTTLDVQIAEFIRNHKQTGVATDDEINDQLVIPFTLDADGIEDLLQRIQDAGI
SITDKEGNPSARVLNNEEEEAELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLSNEEEQE
LAILVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQ
LDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSR
SKPLRDFIED
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaacaaaaagaagtaacaacattagatgttcaaattgcagaatttatccgc
aaccacaagcagacaggtgttgcgaccgatgatgaaatcaatgaccaactggtcattcct
ttcactttggacgctgatgggattgaggatttgctgcaacgcattcaggatgctggcatc
tcaattacagataaggaaggaaatcctagcgcgcgcgtcttaaataatgaagaggaagaa
gcggagctgacggatgaagagctcttaggcagcaattcagccaaggtcaatgacccagtc
cgcatgtatctgaaagaaattggggttgtgccccttctaagcaatgaagaagagcaggag
ttggctatcttggtagagcagggagacttggaagccaagcagcgcctggctgaggccaat
cttcgtctggttgtttccattgctaagcgttatgtcggccgtggtatgcagttccttgac
ttgattcaagaaggaaacatggggctgatgaaggccgttgataagtttgactataccaaa
ggatttaagttttcaacttatgcgacttggtggatccgtcaggccattacccgtgcgatt
gctgaccaagctcggactattcggattccggtccatatggtggaaaccattaacaagcta
gtccgcgagcaacgtaatctcttgcaggaattaggtcaagacccaacaccagagcaaatc
gctgagcgcatggatatgacaccggataaagttcgtgagattctcaagattgctcaagag
ccagtttctttggaaacacctatcggtgaggaagatgacagccatctgggtgactttatc
gaagacgaagtgattgaaaatccagttgactatacaactcgtgtcgtccttcgtgagcag
ctggatgaagttttagacacccttacagatcgtgaagaaaatgttcttcgtctgcgcttt
ggtctagacgatggaaaaatgcggacactggaagatgtcggcaaggtcttcaatgtcacc
cgcgagcggattcgccagattgaagccaaagccctgcgcaaactccgccatccaagccgc
agcaaaccactcagagactttattgaagattag
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