Stakelama saccharophila: RPR59_00010
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Entry
RPR59_00010 CDS
T10187
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ssaa Stakelama saccharophila
Pathway
ssaa02020
Two-component system
ssaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPR59_00010
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RPR59_00010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ssaa02022
]
RPR59_00010
02035 Bacterial motility proteins [BR:
ssaa02035
]
RPR59_00010
Two-component system [BR:
ssaa02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
RPR59_00010
Bacterial motility proteins [BR:
ssaa02035
]
Flagellar system
Flagellar assembly proteins
Others
RPR59_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
AAA_3
Mg_chelatase
HTH_28
AAA_2
AAA_16
AAA
AAA_19
AAA_7
HTH_23
Sigma70_r4_2
MerR
HTH_10
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WNO53691
LinkDB
All DBs
Position
869..2122
Genome browser
AA seq
417 aa
AA seq
DB search
MPVIFPSAAVMQGHFALVSALRAQGFTTAPLESRKPAPGDLFLVADGEASPVPARTLILA
QADAMAVTPFHDGAPARLSYPMEEAAVAHGMASALLRGPGAPVAADPESLALMALAERVA
AADITVLINGPTGTGKEVMARTIHNGSKRADGPFIAVNCAALPETMLEAMLFGHQKGAFT
GASSGGEGFFRAAHGGTLLLDEIAEMPIQLQAKLLRALQEREVVPIGGTQAIPIDVRVIA
CANRDLQTEVAEGRFRADLYYRLSVFPLATRSLAERPGDVAALAAAMIVRHGAGRTALPA
LAPEALAMLQNHNWPGNVRELENVIQRAMLLAAPERIEAGDIVFDRVAEPAPTTAAPETL
SNIVQMSEFQAIRETLAACGGSRIKTAKKLGISERTLRYRLAKAREQGDDIVRAVSA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgatctttccgtcagccgccgtcatgcagggccacttcgcgctggtgtcagca
ctgcgcgcccagggcttcaccacggcgccgctcgaatcgcgcaagcccgcacccggcgac
ctgttcctggtcgccgacggcgaagcctcgccggtgccggcgcgcacgctcatcctcgcc
caggcggacgcgatggcggtgacgccgtttcacgacggcgcgccggcccggctgtcctat
ccgatggaagaagccgccgtcgcccacggcatggcgagcgcgctgctgcgcggtcccggc
gcgcccgtcgccgccgatccggagagcctggcgctgatggcgctcgccgagcgcgtggcc
gcggccgacatcaccgtgctgatcaacggaccgaccggcaccggcaaggaggtgatggcg
cgcacgatccataacggttcgaagcgcgccgacggaccgttcatcgcggtcaattgcgcc
gcgctgccggaaacgatgctggaagccatgctgttcggccatcagaagggcgccttcact
ggtgcttcttcgggcggagaaggctttttccgggccgcgcatggcggcacgctgctgctc
gacgagatcgcggaaatgcctatccagcttcaggcgaagctgctgcgggcgctgcaggag
cgcgaggtcgtgccgatcggcggcacccaggccattcccatcgacgtccgggtcatcgcc
tgcgccaaccgcgatctgcagaccgaagtggccgagggccgcttccgcgccgatctctat
tacaggctgagcgtctttccgctcgccacccgctcgctcgccgagcgaccgggcgatgtg
gcggcgcttgccgcggcgatgatcgtgcggcacggcgccgggcgcaccgccctgcccgcg
ttggcgcccgaggcgctggcgatgctgcagaaccacaactggcccggcaatgtccgcgag
ctggaaaacgtcatccagcgggccatgctgctcgcggcaccggagcggatcgaggccggc
gacatcgtcttcgaccgcgtcgccgagcccgcacccaccaccgcggctccggagacgctc
agcaacatcgttcagatgtcggaattccaggccatccgcgaaacgctcgcagcctgcggc
ggcagccggatcaagaccgccaagaagctgggcatttccgagcgcaccctgcgctatcgg
ctggccaaggcgcgcgaacagggcgatgacatcgtccgggcggtgtcggcatga
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