Stakelama saccharophila: RPR59_00115
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Entry
RPR59_00115 CDS
T10187
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa00300
Lysine biosynthesis
ssaa00470
D-Amino acid metabolism
ssaa01100
Metabolic pathways
ssaa01110
Biosynthesis of secondary metabolites
ssaa01120
Microbial metabolism in diverse environments
ssaa01230
Biosynthesis of amino acids
Module
ssaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPR59_00115 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPR59_00115 (lysA)
Enzymes [BR:
ssaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RPR59_00115 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WNO53712
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Position
complement(18936..20195)
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AA seq
419 aa
AA seq
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MDFFSQRAGSLHAEDVPLDRIAEAVGTPAYVYSRATLERHARVFRDGLKQIERLHLAFAI
KANPNLAVLRVLADRGYGADVVSGGEMARALAAGVPARDIVFSGVGKTIGELERALDVGI
GQFNLEHEPEGRALAGLAAARGQSAPAVLRVNPDVDAGTHEKISTGRAENKFGVPIDEAR
AMFGRLAAEPGLALRGVAIHIGSQLGDLAPLERAYRRVGELIAMLRGDGHAVTHVDLGGG
LGVPYRPGDVMPSPAEFGAMAARVTQGWDVDLMFEPGRVIAGNAGVLLTRVIWVKPGITH
PYVIVDAAMNDLARPSLYDAYHAFEAVRPSGDRMTANIAGPVCETGDTFAMGREIDRVGP
GDLAVFRTAGAYGATMASTYNSRALVPEVMVDGDRYAVVADRIRPETIMAAERVPDWLT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttttcccaacgggccggcagcctgcatgccgaggatgtcccgctggaccgc
atcgccgaggcggtggggacaccggcctatgtctattcgcgcgccacgctggaacggcat
gcccgggtcttccgcgacgggctgaagcagatcgagcggctgcacctcgcctttgccatc
aaggccaacccgaacctcgccgtactgcgcgtcctggcggatcgcggctacggcgccgac
gtggtctccggtggcgagatggcgcgcgcgctggcggccggcgtgccggccagggacatc
gtgttttccggcgtgggcaagacgatcggagagctggaaagggctctcgatgtcgggatc
gggcagttcaacctggagcacgagccggagggccgggcgctcgccggactggcggcggcg
cgggggcaatccgcgccggcggtgctgcgcgtcaaccccgatgtggatgccggcacccac
gaaaagatttcgaccgggcgcgcggaaaacaagttcggcgtgccgatagacgaggcgcgg
gcgatgttcggccggctcgcggcggaaccgggcctcgccctgcgcggcgtggcgatccat
atcggcagccagctcggtgatctggcgccgctggaacgcgcctatcgtcgggtcggggaa
ctgatcgcgatgctgcgcggcgacggccatgccgtcacccatgtcgatctcggcggcgga
ctgggcgtgccctatcgccccggcgacgtgatgccgagcccggccgaattcggcgcgatg
gcggcgcgcgtgacccaggggtgggatgtcgacctgatgttcgagcccggccgcgtgatc
gcgggcaatgccggggtactgctgacccgcgtgatctgggtaaagccgggcatcacgcat
ccttatgtcatcgtcgatgcggcgatgaacgaccttgcgaggccgtcgctctacgacgcc
tatcacgccttcgaggcggtgcgcccgagcggcgaccggatgacggccaatatcgccggg
ccggtatgcgaaaccggcgacaccttcgccatggggcgcgaaatcgaccgtgtcggaccc
ggcgacctggcggtgttccgcaccgccggcgcctatggcgcgaccatggccagcacctat
aacagtcgcgccctggtgccggaggtcatggtcgatggcgaccgttacgcggtcgtcgcc
gatcgcatccgccccgaaaccatcatggcggccgaacgcgtgccggactggctgacatga
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