Stakelama saccharophila: RPR59_00405
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Entry
RPR59_00405 CDS
T10187
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
ssaa Stakelama saccharophila
Pathway
ssaa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RPR59_00405 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssaa02000
]
RPR59_00405 (choW)
Transporters [BR:
ssaa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
RPR59_00405 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
WNO53764
LinkDB
All DBs
Position
82222..83979
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AA seq
585 aa
AA seq
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MLMPARPVHAAPAAGAQACRTVRLADVGWTDVTATTGTLARILRGLGYRPKTSVLSVPVT
FNGLARGDIDVFLGNWMPMQKADIAPYIENGSIARVRTNLTDARYTLAVPDYLYKRGLTD
FASIAEFGDALNHRIYGIEPGNDGNRLVLGMIAHDQFGLGDFDLVESSEQGMLAQVERAV
RQEKPIVFLGWQPHPMNDRFDMRYLSGGDAVFGPNYGGAKVYTTVRRGYLDACPNVARLL
RNLAFDVEDENALMAGVIATGDAEASAGDWLADHPERLAAWLDGVTTIDGKSADPSMFGS
ADAASAGNFITRHKIPVGAWMTTAVNWIKAHSGLLDLVSTAVGTSIKVLTAALAAIPPLL
FVLLATILTWFLRRSVAITVFVPLALLFIINQGYWDATIQTLALVVFAAAISTAVGVPIG
IWAGHRPRAYEGLRSVLDLMQTLPTFVYLIPTLVIFGLGVVPGLISTIIFALPAPIRLTQ
LGIMSVPKPLIEAGWSFGATDRQLLLRVELPAAAGSILAGITQCIMLSLSMVVIAALVGA
GGLGVPVVRALNTVQVGMGFEAGFAIVLLAIILDRITRRETKGDT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgcccgcacggccggttcatgcggcaccggcggccggcgctcaggcctgccga
acggttcgcctcgccgatgtcggatggacggacgtgaccgcgacgacggggacgctcgca
cggatattgcgcgggctgggatatcggccgaaaacgtccgtattgtcagtaccggtcacc
ttcaacggtctggcgcgcggcgatatcgacgtctttctcggcaactggatgccgatgcag
aaggccgatatcgcgccctatatcgaaaacggttcgatcgcgcgggtgcgcaccaatctt
accgacgcgcgctacacgctggcggtgcccgattatctgtataaacgcggccttaccgat
ttcgcgtcgatcgccgagttcggcgatgcgctgaaccaccgcatctacggtatcgagccg
ggcaatgacggcaaccgcctggtgctcggcatgattgcccacgaccagttcgggctgggc
gatttcgacctggtggaaagcagcgagcagggcatgctcgcgcaggtggaacgtgcggtg
cggcaggagaagccgatcgtgtttctcggctggcagccgcacccgatgaacgaccggttc
gacatgcgctatctctctggcggcgacgcggtgttcggcccgaattacggcggcgcgaag
gtctataccacggttcgccgaggatatctcgacgcgtgccccaatgtcgcccggctgctg
cgcaacctggcgttcgacgtcgaggacgagaacgcactgatggcgggcgtgatcgcaacg
ggcgatgccgaggcgagcgccggtgactggctcgccgatcatcccgaacggctggcggcg
tggctggacggcgtcaccaccatcgacggcaaatccgccgatccttcgatgttcggcagc
gccgacgctgcgtcggccggcaatttcatcacccggcacaagatcccggtcggggcgtgg
atgacgaccgcggtgaactggatcaaagcgcacagcggcctgctcgacctcgtatccacc
gcggtcggcaccagtatcaaggtgctgaccgccgcgctcgccgcgataccgccgctcctc
ttcgtgctgctcgcaacgatccttacctggttcctcaggcgctcggtggcgatcacggtc
ttcgttccgctcgcgctcctgttcatcatcaatcagggatattgggacgccacgatccag
acgctcgcgctcgtcgtattcgccgccgcgatctcgacggcggtgggcgtgccgatcggc
atctgggcggggcaccgcccgcgcgcctatgaaggactgcgctcggtcctcgatttgatg
cagaccctgccgaccttcgtctatctgatccccacgctcgtcatcttcggcctgggtgtg
gtgccggggctgatatcgacgatcatcttcgccctgccagcgcccatccggctgacgcaa
ctgggcatcatgtcggtgcccaagccgctgatcgaggccgggtggtcgttcggtgcgacc
gaccggcaattgctgctgcgcgtcgaactgccggccgcggcggggtcgatcctcgccggc
atcacgcagtgcatcatgctcagcctgtcgatggtggtcatcgcggcgctcgtcggcgcc
gggggacttggcgtaccggtggtgcgcgcgctcaacaccgtgcaggtcggcatgggcttc
gaggccggcttcgccatcgtcctgctcgcgatcatcctcgaccggatcacgcgccgcgaa
accaagggagacacgtaa
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