Stakelama saccharophila: RPR59_00805
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Entry
RPR59_00805 CDS
T10187
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPR59_00805 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssaa03019
]
RPR59_00805 (recQ)
03400 DNA repair and recombination proteins [BR:
ssaa03400
]
RPR59_00805 (recQ)
Enzymes [BR:
ssaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPR59_00805 (recQ)
Messenger RNA biogenesis [BR:
ssaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RPR59_00805 (recQ)
DNA repair and recombination proteins [BR:
ssaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RPR59_00805 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
RQC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WNO53831
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All DBs
Position
169525..171291
Genome browser
AA seq
588 aa
AA seq
DB search
MTDPTDILRTTFGFSGFRGVQHSVVERVLAGERTLAVMPTGAGKSLCYQLPAVAMAGTCV
VVSPLIALMHDQLRAAEAVGIRAATLTSVDDNRAETVARFRAGELDLLYVAPERASSGHF
RDLLGQAKLALFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPDVPRLALTATADAHTRAD
ILDQLGIPRDGLIVAGFDRPNIRYAISPRSNTTKQLSDIIAENPGPGIVYAQTRAQTEKL
AEALARTGRPTRAYHAGLDPAVRARNQADFVASEDMVICATVAFGMGIDKPDVRFVAHAG
TPKSIEAYYQETGRAGRDGDPAVAHLFWGADDFARARQRIGEVEPARQAGERARLTALGA
LVETAGCRRAILLRHFGEDPPESCGNCDNCLHPPKAVDASVTAQKFLSAVFRTGQMFGVG
YVESVLLGKSSERSLMNGHEKLSVWGIVEEDEAALIKPVSRALLLRDALRTNPHGGLEFG
PAARPILKGEATVELVLPPRRERRRRGGANSSPNPVGNPLFEALRDLRREIAQETGLPPY
VIFHDSVLRDMALSRPGTLSAMGEISGVGAKKLEAYGQAFLNIIREAA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcccaccgacatcctgcgcaccaccttcggcttttccggttttcgcggcgtc
cagcactcggtggtggagcgcgtgctggcgggtgagcggacgctggcggtgatgccgacg
ggcgcgggcaagtcgctatgctaccagttgccggcggtggcgatggcgggcacctgcgtg
gtcgtgtcgccgctgatcgcgctgatgcacgaccagttgcgcgcggcggaagccgtcggc
atccgcgcggccacgctgacgagcgtcgacgacaaccgcgccgagacggtggcgcggttc
cgggcgggcgagctggacctgctctatgtcgcgcccgaacgcgcgtcgtcgggccatttc
cgtgacctgctgggacaggcgaagctcgcgctgttcgcgatcgacgaggcccattgcgtt
tccgaatggggccatgacttcaggcccgattaccgcctgctccgccccctgctcgacgcg
tttcccgacgtcccccgactggcgctgacggcgacggcggatgcgcatacgcgcgccgac
attctcgatcagctcggcatcccgcgcgacgggctgatcgtcgcggggttcgaccggccc
aatatccgctatgcgatttccccgcgaagcaatacgacgaagcagctttccgacatcatc
gcggaaaatcccgggccgggcatcgtctatgcgcagactcgcgcgcagaccgaaaagctg
gcggaggcgctcgcccgcaccggccggccgacacgcgcttatcatgccgggctcgacccg
gcggtgcgcgcgcgcaaccaggccgatttcgttgcatccgaggacatggtgatctgcgcc
accgtcgcgttcggcatgggaatcgacaagcccgatgtgcgcttcgtcgcgcatgccggc
acgcccaagtcgatcgaagcctattaccaggaaaccggccgcgcggggcgcgacggcgat
ccggcggtggcgcacctgttctggggcgccgacgatttcgcccgcgcgcgccagcggatc
ggcgaggtcgaaccggcgcggcaggcgggggagcgggcgcggctgaccgcactcggcgca
ctggtcgagaccgccgggtgccggcgcgcgatcctgctgcgccatttcggcgaggacccg
cccgagagttgcggcaattgcgacaattgcttgcacccgcccaaggcggtcgatgcgagt
gtgacggcgcagaaattcctatccgccgtattccgcaccgggcagatgttcggcgtcggc
tatgtcgagagcgtgctgctgggcaaatcgtccgagcgcagcctgatgaacgggcacgag
aaactgtcggtatggggcattgtcgaggaggatgaggcggcgctgatcaagccggtcagc
cgcgcgctgctgctgcgcgatgcgctgcgtaccaacccgcatggcggactggaattcgga
ccggctgcgcggccgatcctgaagggcgaggcgacggtcgagctcgttctgccgcccagg
cgcgaacggcggcggcgcggcggggccaatagctcgcccaatccggtcggcaatccgctg
ttcgaggcgctgcgcgacctgcggcgcgaaatcgcgcaggaaaccgggctgccgccttat
gtcatcttccacgattcggtgctgcgcgacatggcgctcagccgccccggcacgctgtcg
gcgatgggcgagatttcaggcgttggcgcgaagaaactggaagcctatggtcaggcattt
ctcaacatcattcgagaggcggcctag
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