Stakelama saccharophila: RPR59_01725
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Entry
RPR59_01725 CDS
T10187
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ssaa Stakelama saccharophila
Pathway
ssaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPR59_01725 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssaa03021
]
RPR59_01725 (rho)
03019 Messenger RNA biogenesis [BR:
ssaa03019
]
RPR59_01725 (rho)
Transcription machinery [BR:
ssaa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RPR59_01725 (rho)
Messenger RNA biogenesis [BR:
ssaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RPR59_01725 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
ATPase_2
Spore_III_AA
S1CSD-TOTE-2
AAA_22
AAA_25
AAA_14
AAA
GpA_ATPase
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
WNO54004
UniProt:
A0ABZ0B9N8
LinkDB
All DBs
Position
357988..359244
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AA seq
418 aa
AA seq
DB search
MHLKDLKKKAPAELVEMAESLGVEGASTMRKQDLMFAILKVQAEQGEQIMGLGTIEVLSD
GFGFLRSPEANYLAGPDDIYVSPNQVRKFGLRTGDTVEGEIRGPKDGERYFALTKLLKVN
FDDPDVVRHRVNFDNLTPLYPEKKLTLDPQDPTVKDKSARVIDIVSPQGKGQRSLIVAPP
RVGKTVLLQNIAKAITDNHPEVFLIVLLIDERPEEVTDMQRSVNGEVISSTFDEPAQRHV
QVAEMVIEKAKRLVEHKHDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEELLVDKATLSKMWVLRRILMQMGTIDAMEFLLDKMKDSKTNEDFFASMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaggatctcaagaaaaaggcgcctgccgaactcgtagaaatggcggaatcg
ctgggcgtcgaaggcgcctcgaccatgcgcaaacaggatctcatgttcgcgatcctgaag
gtgcaggccgaacagggcgaacagatcatggggctgggcaccatcgaggtgttgtccgat
ggcttcggctttctgcgctcgcccgaggcgaactatctcgcaggaccggacgatatctac
gtttcgcccaaccaggtccgaaagttcggcctgcgcaccggcgataccgtcgagggcgag
atccgcggtcccaaggacggcgagcgctatttcgccctgacgaagctgctcaaggtcaat
ttcgacgatcccgatgtcgttcgccaccgcgtcaatttcgacaatctgacgccgctttat
ccggaaaagaagctcacgctcgatccgcaggacccgaccgtcaaggacaagtcggcgcgc
gtcatcgacatcgtcagcccgcagggcaaggggcagcgctcgctgatcgtcgcgccgccg
cgcgtcggcaagacggtgctgctgcagaacatcgccaaggcgatcaccgacaatcatccg
gaagtcttcctcatcgtactgctgatcgacgagcggccggaggaagtgaccgacatgcag
cgctcggtgaatggcgaggtgatttcctccaccttcgacgaaccggcgcagcgccacgtc
caggtcgccgagatggtgatcgaaaaggccaagcgcctggtcgagcacaagcacgacgtc
gtcatcctgctcgattcgatcacgcgcctcggtcgcgcctacaacaccgtggtgccgagc
tcgggcaaggtgctgaccggcggtgtcgatgccaacgcgctgcagcggccgaagcgcttc
ttcggtgccgcgcgcaatatcgaagagggcggttcgctttcgatcatcgccaccgcgctg
atcgacaccggcagccgcatggacgaggtcatcttcgaggaattcaagggcaccggcaat
tccgagatcgttctcgaccgcaaggttgccgacaagcgcatcttccccgcgctcgatgtc
ggaaaatcgggcacgcgcaaggaagagctgctggtcgacaaggcgacgctgtcgaagatg
tgggtgcttcgccgtatcctcatgcagatgggcacgatcgacgcgatggaattccttctc
gacaagatgaaggattcgaagaccaacgaggatttcttcgcatcgatgaaccagtaa
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