Stakelama saccharophila: RPR59_03990
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Entry
RPR59_03990 CDS
T10187
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa00010
Glycolysis / Gluconeogenesis
ssaa00020
Citrate cycle (TCA cycle)
ssaa00260
Glycine, serine and threonine metabolism
ssaa00280
Valine, leucine and isoleucine degradation
ssaa00310
Lysine degradation
ssaa00380
Tryptophan metabolism
ssaa00620
Pyruvate metabolism
ssaa00630
Glyoxylate and dicarboxylate metabolism
ssaa00640
Propanoate metabolism
ssaa00670
One carbon pool by folate
ssaa00785
Lipoic acid metabolism
ssaa01100
Metabolic pathways
ssaa01110
Biosynthesis of secondary metabolites
ssaa01120
Microbial metabolism in diverse environments
ssaa01200
Carbon metabolism
ssaa01210
2-Oxocarboxylic acid metabolism
ssaa01240
Biosynthesis of cofactors
Module
ssaa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssaa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssaa_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ssaa_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RPR59_03990 (lpdA)
00020 Citrate cycle (TCA cycle)
RPR59_03990 (lpdA)
00620 Pyruvate metabolism
RPR59_03990 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
RPR59_03990 (lpdA)
00640 Propanoate metabolism
RPR59_03990 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RPR59_03990 (lpdA)
00280 Valine, leucine and isoleucine degradation
RPR59_03990 (lpdA)
00310 Lysine degradation
RPR59_03990 (lpdA)
00380 Tryptophan metabolism
RPR59_03990 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RPR59_03990 (lpdA)
00670 One carbon pool by folate
RPR59_03990 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssaa04147
]
RPR59_03990 (lpdA)
Enzymes [BR:
ssaa01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RPR59_03990 (lpdA)
Exosome [BR:
ssaa04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RPR59_03990 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
FAD_binding_2
HI0933_like
NAD_binding_8
AlaDh_PNT_C
FAD_binding_3
Thi4
Lys_Orn_oxgnase
DAO
DUF7759
Dicer_PBD
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WNO54424
LinkDB
All DBs
Position
complement(877108..878499)
Genome browser
AA seq
463 aa
AA seq
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MAEYDYDVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKAMLHASE
YFDAAANGAMAKMGVKVTPELDLDTMHGQRKDAVKQLTGGIEFLFKKNKVNWLKGKASFE
DAHTVSVNGEKVTAKNVVIATGSSVTPLPGVEIDEKVVVSSTGALELPKVPKHMVVIGGG
VIGLELGSVWRRLGAKVTCVEFLDQILPGFDGDVRKEANKIFKKQGIEFRLGTKVTGVAV
KGDKATLTLEPAKGGDAETIEADCVLVSIGRRPNTDGLALDKAGLETNERGQIEIDHDFR
TKADGVWAIGDVVPGPMLAHKAEDEGLAVAENIAGQTGIVNHDVIPSVVYTWPEIAGVGL
TAEAAKEKGEVKVGKFPMMANSRAKTNHEPEGFVKVIADAKTDRVLGVWCIASVAGTMIA
QAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatacgattatgacgtcctggtaatcggcgccggtcccggcggctatgtcgcg
gcgatccgggcggcgcagctcggactgaagaccgcatgcgccgaatcgcgcgagacgctg
ggcgggacctgcctcaacgtcggctgcatcccgtccaaggcgatgctccacgcctccgaa
tatttcgatgccgcggcgaatggcgcgatggcgaagatgggcgtcaaggtgacgcccgaa
ctcgacctcgacacgatgcacggccagcgcaaggatgcggtcaagcagctcaccggcggc
atcgagttcctgttcaagaagaacaaggtcaactggctcaagggcaaggcgagcttcgag
gacgcgcacaccgtttcggtgaatggcgaaaaggtcacggcgaagaacgtcgtcatcgcc
accggctcgtcggtcaccccgctgcccggcgtcgagatcgacgagaaggtcgtcgtctcc
tccaccggcgcgctcgaactgcccaaggtgccgaaacacatggtcgtcatcggcggcggc
gtgatcgggctcgaactcggcagcgtgtggcgcaggctgggcgcgaaggtcacctgcgtc
gaatttctcgaccagatcctgcccggcttcgacggcgatgtccgcaaggaagcgaacaag
atcttcaagaagcagggtatcgagttcaggctcggcaccaaggtcaccggcgtggcggtg
aagggcgacaaggccacgctgacgctcgaacccgcaaagggcggcgatgccgagacgatc
gaggcggactgcgtcctcgtgtcgatcgggcgcaggcccaacaccgatggcctcgcgctc
gacaaggcggggctcgaaaccaatgagcgcggccagatcgaaatcgaccatgatttccgc
acaaaggccgacggcgtctgggcgatcggcgatgtcgtccctggtccgatgctcgcgcac
aaggcggaggacgaggggctggcggtagcggagaatatcgccgggcagacgggaatcgtg
aatcacgacgtgatcccgagcgtcgtctatacctggcccgaaatcgccggcgtcggcctg
accgcggaagcggcgaaggaaaagggcgaagtgaaggtcggcaagttcccgatgatggcg
aacagccgcgccaagaccaatcacgagcccgagggcttcgtgaaggtgatcgccgatgca
aagaccgaccgtgtgctgggcgtgtggtgcatcgcgagcgtcgccggcacgatgatcgcg
caggccgcgcaggcgatggaattcggcgcgacgagcgaggacatcgcctatacctgccac
gcgcatcccacgcattcggaagcgatcaaggaagcggcgatggccgtgacgggcaagccg
atccacatctga
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