KEGG   Stakelama saccharophila: RPR59_04280
Entry
RPR59_04280       CDS       T10187                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ssaa  Stakelama saccharophila
Pathway
ssaa00061  Fatty acid biosynthesis
ssaa00071  Fatty acid degradation
ssaa01100  Metabolic pathways
ssaa01212  Fatty acid metabolism
ssaa02024  Quorum sensing
ssaa04146  Peroxisome
Module
ssaa_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ssaa00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RPR59_04280
   00071 Fatty acid degradation
    RPR59_04280
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RPR59_04280
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RPR59_04280
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ssaa01004]
    RPR59_04280
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssaa04147]
    RPR59_04280
Enzymes [BR:ssaa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RPR59_04280
Lipid biosynthesis proteins [BR:ssaa01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RPR59_04280
Exosome [BR:ssaa04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RPR59_04280
  Exosomal proteins of breast cancer cells
   RPR59_04280
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 DUF7373
Other DBs
NCBI-ProteinID: WNO54479
LinkDB
Position
complement(946488..948278)
AA seq 596 aa
MRTLEHFPNLVAMFFARAREKGDAPFLWHKDGGQWVPLSWAAAARQVASLAAALRAKGLQ
PGERVMLVSENRPEWCISDLAIMAAGCVTVPTYTTNTERDHQHIIDNSGARAVIVSNAKL
AKTLFPAVLRSSTVQIVIGIDAIRAGQAGSIDYYDWHTLVSEFPRDAAAAAAEADFARED
LACIIYTSGTGGSPRGVMQHHGAILHNCAGCVSIIAEDFGWDDEVFLSFLPLSHAYEHTG
GQHLPIALGAQIYYAEGLDKLAANIEETRPTIMVVVPRLFEVLRTRIVRQIEKQGRFATF
LLDQAVAIGTRAKDGRIALRDWPMDLFLRRTLKPKIARRFGGRMKAMVSGGAPLNPEVGT
FFQALGLTFLQGYGQTEAAPVIACNRPSAGLKMDTVGPPLPNTEVRIAADGEILVRGELV
MHGYWRQEAETARVLKDGWLHTGDVGDIDAKGRIRITDRKKDLIINDKGDNIAPQKVEGM
LTLQPEIVQAMIAGDRKPYMVAVIVPDPEWTAQWCAQSATGCDFAKLAQDHDYRAAVGKA
VERVNRDLVVAERVRRFILADAPFTIENEQLTPSLKIRRHILKQAYGERLDALYRG
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgcgaacgctcgaacactttcccaatctcgtcgccatgttcttcgcgcgggcacgcgaa
aagggcgatgcgccgttcctctggcacaaggacggggggcagtgggtgccgctgagctgg
gcggcggcggcacgtcaggtcgccagcctcgccgccgcgctgagggccaagggattgcag
cccggcgagcgggtgatgctggtgagcgagaaccggcccgaatggtgcatctccgacctg
gcgatcatggcggccggttgcgttaccgtgccgacctacaccaccaataccgaacgcgat
caccagcatatcatcgacaatagcggcgcgcgtgccgtcatcgtttccaacgcgaagctg
gcaaagacgctttttcccgccgttctgcgctcttcgaccgtgcagatcgtgatcggcatc
gacgcgatccgggccggccaggccggctcgatcgactattatgactggcacacgctcgtg
tccgaatttccccgcgatgccgcggcggcggcggccgaggcggacttcgcccgcgaggat
ctggcctgcatcatctataccagcggcaccggcggctcgccgcgcggggtgatgcagcac
cacggagcgatcctgcacaattgcgcggggtgcgtatccatcattgccgaagatttcggc
tgggacgacgaggtgttcctgtccttcctgccgctttcccatgcctatgaacataccggc
ggacaacatctcccgatcgcgttgggggcgcagatctattacgccgaagggctcgacaag
ctggccgcgaatatcgaggagacccgccccaccatcatggtcgtggtgccgcgcctgttc
gaggtgctgcgcacacggatcgttcggcagatcgaaaagcagggcaggttcgcgacgttc
ctgctcgaccaggcggtcgcgatcggcacgcgcgcaaaggacggcaggatcgcgcttcgc
gactggccgatggacctgttcctgcgccgcacgctgaagccgaagatcgccaggcgcttc
ggcggccggatgaaggcgatggtctccggcggcgcgccgctgaacccggaagtcggcacc
ttcttccaggcattgggtctcaccttcctgcagggctacggccagaccgaagccgcgccg
gtcatcgcctgcaatcgcccgtcggcggggctcaagatggatacggtcggcccgccgctg
cccaacacggaagttcggatcgccgcggacggcgagatcctggtgcgcggcgaactcgtc
atgcacggatattggcgccaggaggccgaaacggcgcgcgtgctgaaggacggttggctg
cacaccggcgatgtcggcgacatcgatgcgaaagggcgcatccgaattaccgaccgcaag
aaggacctgatcatcaacgacaagggcgacaatatcgccccgcagaaggtcgagggtatg
ctcaccctgcagccggagatcgtgcaggcgatgatcgccggcgaccgaaagccctatatg
gtcgccgtgatcgttcccgatccggaatggacggcgcagtggtgcgcgcagagcgccacc
ggctgcgacttcgccaaattggcgcaggaccatgactaccgcgccgccgtcggcaaggcg
gtggagcgcgtgaaccgggatctggtcgtcgccgagcgggtgcgccgcttcatcctggcg
gacgcgccgttcaccatagagaacgaacagctcacgccgtcgctgaaaatccggcgccat
atcctgaaacaggcctatggcgagcggctggatgcgctttatcgcggttga

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