Stakelama saccharophila: RPR59_04750
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Entry
RPR59_04750 CDS
T10187
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa03018
RNA degradation
Brite
Enzymes [BR:
ssaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RPR59_04750
Messenger RNA biogenesis [BR:
ssaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RPR59_04750
Ribosome biogenesis [BR:
ssaa03009
]
Prokaryotic type
rRNA helicases
RPR59_04750
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNO54568
LinkDB
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Position
complement(1044653..1046413)
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AA seq
586 aa
AA seq
DB search
MTFSTLPTVFGDALAERGYAEPTAVQAAVLAPEALGRDLIVSAQTGSGKTVAFGLSLADD
LLGSLAAPARTPLALIVAPTRELALQVSRELGWLYARAGARIATCVGGMDASKERRALRG
GAHIVVGTPGRLRDHLERGALDLSSLRAVVLDEADEMLDMGFREDLEEILDATPEGRRTL
LFSATMPKPIVALARRYQRDALRIATAGDDRGHGDIAFQAVTVSPAEIEAAAINLLRFHE
AETAILFCATRDNVRRLHATLQERGFAVVALSGEHSQSERNQALQALRDRRARVCVATDV
AARGIDLPSLSLVIHVEIPRDAETLQHRSGRTGRAGRKGTAVLIVPYPRRKRVESMLRGA
RINADWIEAPTPETIRARDRERLLSDLLQPAEYDDEDRALAQRLLAERSPEDIAAALVRA
HRAAMPQPEDMIENTPEARRAAQQERHRPGFEDVMWFRLDIGRRQNADPRWLLPLLCRRG
HITRNEVGAIRIGANETHFQVPRAIAGKFNAALARTANDDGDEESVRIEPSDGPREAARG
NRNAKARKPRQGGPKARGGGQASRAAGARGRDGAKGSGRGRRQRPS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccttttccacccttccgaccgtattcggcgacgcgcttgccgaacgcggctatgcc
gagcccactgccgttcaggccgccgttctcgcgcccgaggcactcggccgcgatctgatc
gtctccgcccagaccggctcgggcaagaccgtcgccttcgggctttcgctggctgacgac
cttctcggcagtcttgccgcgccagcgcgcaccccgctcgcgctgatcgtcgcgccgacg
cgcgaattggcgttgcaagtgagccgggaactgggctggctctatgccagggccggcgcg
cgcatcgccacctgcgtcggcggcatggacgcatcgaaggaacggcgcgcattgcgcggc
ggcgcgcatattgtcgtcggcacgccggggcgactgcgcgaccatctcgaacgcggcgcg
ctcgacctgtcctcgctccgcgcggtggtgctcgacgaagccgacgaaatgctcgacatg
gggtttcgcgaagatctcgaggaaatcctcgacgcgacgccggagggtcggcgcacgctg
ctgttttccgccacgatgccaaagcccatcgtcgcgctggccagacggtatcagcgcgat
gcgctgcgcatcgcgaccgccggcgacgaccgcgggcacggcgacatcgcctttcaggcg
gtgaccgtctcgcccgccgaaatagaagccgcggcaatcaatctgttgcgctttcacgag
gccgagacggcgatcctgttctgcgccacgcgcgacaatgtccgccggctgcacgccacc
ttgcaggagcgcggtttcgccgtcgtcgcgctgtcgggcgaacattcgcagtcggagcgc
aaccaggcgcttcaggcgctgcgcgaccggcgcgcccgcgtctgcgtggcgaccgatgtc
gccgcgcgcgggatcgacctgccgagcctgagcctcgtcatccatgtcgagattccgcgc
gacgccgaaacgctgcaacaccgctccggccgtacaggccgtgcgggaaggaagggaacg
gcggtgctgatcgtcccctatccacgccgcaagcgcgttgaatcgatgctgcgcggcgcg
cggatcaacgccgactggatcgaagcgccgacgcccgagacgatccgcgcgcgggatcgc
gaacggctgctgtccgacctgctccagcccgccgagtatgacgacgaggatcgcgcgttg
gcgcagcgcctgctcgccgaacgctcgcccgaggacatcgccgcggcgctggttcgcgcg
caccgcgccgccatgccgcagcccgaggacatgatcgagaacacgcccgaggcgcgccgc
gccgcacagcaggagcgccaccggcccggctttgaagacgtcatgtggttccgcctcgat
atcgggcgccggcagaatgccgatccgcgctggctgctcccgctgctgtgccggcgcggc
catatcacccgcaacgaggtcggcgcgatccgcatcggcgccaacgaaacccattttcag
gtgccgcgcgccattgcgggcaagttcaacgccgcgcttgcccgcacggcgaatgacgat
ggcgatgaagagagtgtccggatcgagccatccgacggcccccgcgaagctgcgcgcggc
aaccgaaatgcgaaggcgcgcaagccccggcaaggcggcccgaaagcacgcggcggcgga
caggcctctcgcgctgccggagccaggggacgggacggtgcgaagggcagcggaaggggc
cgcaggcagcgcccgtcctaa
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