Stakelama saccharophila: RPR59_06435
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Entry
RPR59_06435 CDS
T10187
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPR59_06435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssaa03021
]
RPR59_06435
03400 DNA repair and recombination proteins [BR:
ssaa03400
]
RPR59_06435
Enzymes [BR:
ssaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPR59_06435
Transcription machinery [BR:
ssaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPR59_06435
DNA repair and recombination proteins [BR:
ssaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPR59_06435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Phage_tube_2
IDH
Motif
Other DBs
NCBI-ProteinID:
WNO54878
LinkDB
All DBs
Position
1377432..1378496
Genome browser
AA seq
354 aa
AA seq
DB search
MSVNAKNWQELKKPNGLEKKSGGDSKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPAEVKAGDI
AVSGDIEVLNPDLVLCHLDDGATLNMELTADTGKGYVPAVANRPADAPIGLIPVDSLYSP
VRQVSYKVDPTRVGQDLDYDKLTLTIETDGTIGPDDALAYGARILQDQLALFVHFDDSAL
AAAQPAGAAQPGGAAEGEGDTAQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQEILG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcaacgcaaagaactggcaggaactcaagaagcccaacggcctcgaaaagaag
tccggcggcgattccaagcgcaaggcgacgttcgtcgccgagccgttggagcgcggattc
ggcctgacgctcggcaacgcgcttcggcgcgtgctgctgtcgtcgcttcagggtgcggcc
gtcacctcgatcaagatcgagaatgtgctgcacgaattttcgagcctcgcaggcgttcgc
gaggacgtgaccgacatcgtcctcaacgtgaagcagatcgcgcttaagatggaaggcgag
gggccgaagcggcttcagctttccgcgaccggtccggccgaggtgaaggccggcgacatc
gccgtttccggcgacatcgaagtgctgaacccggatctggtgctgtgccacctggatgac
ggcgcgacgctgaacatggaactgaccgccgacaccggcaagggatatgtccctgcggtg
gcgaaccggcccgcggatgcgccgatcggcctgattccggtcgattcgctgtattcgccg
gtgcgccaggtcagctataaggtcgatcccacccgcgtcggccaggatctcgattacgac
aagctgacgctgacgatcgagaccgacggcacgatcggacccgacgatgcgctggcttat
ggtgcccgcattctccaggaccagctcgcgctgttcgtgcatttcgacgattccgcgctg
gctgcggcccagcccgccggtgcggcgcagccgggtggtgccgccgaaggcgagggcgat
accgcgcagatcaatcggtatctgctcaagaaggtcgacgagctggaactgtcggtgcgg
tcggccaactgcctcaagaacgacaacatcatctatatcggcgacctggtccagaagacc
gaggccgagatgctccgcacgccgaatttcggccgcaagtcgttgaacgagatcaaggaa
gtgctctcgtccatgggcctgcggctcggtatggacatccccggctggccgccggagaat
atcgaggaaatggccaagaagctcgagcaggaaatcctcggctaa
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