Stakelama saccharophila: RPR59_08060
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Entry
RPR59_08060 CDS
T10187
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa00550
Peptidoglycan biosynthesis
ssaa01100
Metabolic pathways
ssaa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPR59_08060 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RPR59_08060 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssaa01011
]
RPR59_08060 (mrdA)
Enzymes [BR:
ssaa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RPR59_08060 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssaa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RPR59_08060 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
DUF7440
Motif
Other DBs
NCBI-ProteinID:
WNO52435
LinkDB
All DBs
Position
complement(1745227..1747266)
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AA seq
679 aa
AA seq
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MKLPKRSMSKAEQAFSFSRRAMMLGLGQGAVGLVLAGRMGWLAVAENEHYKLLSESNRVN
MTLIPPRRGWIVDRNGAPIANNRTDFRVDIIPDRLENKEAVLTRLQGILALTADDMARVR
KDLRHAAGFRPVQVSENLDWDRFASVSVRLPELTGVAPSRGFARNYPLGPAVAHLVGYVG
SASSEQYAEEKDPLLITPGFKLGKDGLEKALEDRLRGKPGAKRIEVTARGRLVRELATRP
DVPGETVRLTIDAGLQEYAARRMGPNSGSAVVVDVYTGDMLAMVSMPAYDPNSFSEGIGR
MEWKMLSQDDHIPLMNKTLQGLYPPGSTVKPMHGLALLRNGISADQTVYCGGVMRVGRGR
FHCWKPGGHGHIDMHRAIPQSCDIYFYTMARELGYDRFAPTAHDMGLGARFDLPFLSQYY
GTVPDSAWKMRKYGKEWTVADSINASIGQGYVLVNPMQLAVMAARIAGGRKVVPRILLDQ
PHRPAASMNFDPEHLKIIREAMWAVVNHGGTGGAARMNIGGIDMAGKTGTAQVRRITMAD
RRAGRTGNASFPFKMRDHALFAGFAPAANPRYAVSVVVEHGGHLIRNLDAPMLASDILSY
LFDREKAIKKLTELEKTWGGDIGARMKAKEAAFAAAQKATAAPPPEDEAAAQRAAVEEAA
TTDRSAVANAASDGSERPE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccgaagcgatcgatgagcaaggcggagcaggcgttcagcttctcgcgccgc
gcgatgatgctggggttgggccagggcgcggtcggacttgtgctcgcggggcggatgggc
tggctcgccgtcgcggaaaacgaacattacaaacttctgtcggagagcaatcgcgtcaac
atgacgctgatcccgccccgccgcggctggatcgtcgatcgcaacggcgcgccgatcgcg
aacaaccgcaccgatttccgggtggatatcattccagaccgcctggaaaacaaggaggcc
gtgctgacgcggctccagggtatcctggccctgactgcggacgatatggcacgggtgcgc
aaggacctgcggcacgcggcgggctttcgccccgtgcaggtcagcgaaaatctggactgg
gatcgctttgccagcgtctccgtgcgcttgcccgaactcaccggtgtcgcaccgtcgcgg
ggatttgcccggaactatccgctcggccccgccgtggcccatctggtcggctatgtcggc
tccgcgtcgtccgaacaatatgcggaagaaaaggaccctctgctcatcacaccgggattt
aagctcggcaaggatggtcttgaaaaggcactggaagatcggctgcgcggcaagccgggc
gccaagcggatcgaagtcacggcgcgaggccgcctggtgcgcgagctggcgacgcggccc
gacgtgcccggcgaaaccgtccggctgacgatcgacgcagggcttcaggaatatgccgca
cgccggatggggccgaattcgggatcggccgtcgttgtcgacgtctataccggcgacatg
ctggcgatggtgtcgatgcccgcctatgaccccaacagcttttccgaaggcatcggccgg
atggaatggaagatgctgtcgcaggacgaccatattccgctgatgaacaagacgctgcag
ggcctgtatccgccggggtccacggtgaagccgatgcacggcctggccctgttgcgcaac
ggcatcagcgccgatcagacggtatattgcggcggcgtgatgagggtcggtcgcggccgt
tttcactgctggaagcccggcggtcacgggcacatcgacatgcaccgcgccattccgcaa
agctgcgacatctatttctacacgatggcgcgcgaactcggctatgatcgtttcgccccg
accgcgcacgacatggggttgggcgcgcgcttcgacctgcccttcctttcgcaatattac
ggcaccgtgcccgacagcgcgtggaagatgcgcaaatatggcaaggaatggacggtcgcc
gattcgatcaacgcgtcgatcggccaaggctatgtgctcgtcaatccaatgcaactggcc
gtcatggccgcgcggatcgccggcggacgcaaggtggtgccgcgcatcctgctcgatcag
ccgcatcgcccggcggcatcgatgaacttcgaccccgaacacctcaagatcatccgcgaa
gcgatgtgggcggtcgtcaaccatggcggcacgggtggcgccgcgcgcatgaacatcggc
ggtatcgacatggccggcaagaccggcacggcgcaggttcgccgcatcaccatggctgat
cgccgcgcgggtcgcacgggcaatgcgagctttccgttcaagatgcgcgatcacgcgttg
ttcgccggcttcgcgcctgccgccaatccgcgttacgccgtatccgtcgtcgtcgaacat
ggcgggcatcttatccgcaatctggacgcgcccatgcttgccagcgacattctcagctac
ctgttcgaccgtgaaaaggcgatcaagaagcttaccgagctcgaaaagacctggggcggc
gacatcggggcgcggatgaaggccaaggaagccgctttcgccgcggcgcaaaaagcgacg
gccgctccgcctcccgaggacgaggcagccgcccagcgcgcggcggtggaagaagcggcg
acgaccgacagaagcgccgtcgccaacgccgcgagcgacggttcggagcggcccgaatga
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