Stakelama saccharophila: RPR59_08210
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Entry
RPR59_08210 CDS
T10187
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa03030
DNA replication
ssaa03430
Mismatch repair
ssaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPR59_08210 (dnaE)
03430 Mismatch repair
RPR59_08210 (dnaE)
03440 Homologous recombination
RPR59_08210 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssaa03032
]
RPR59_08210 (dnaE)
03400 DNA repair and recombination proteins [BR:
ssaa03400
]
RPR59_08210 (dnaE)
Enzymes [BR:
ssaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPR59_08210 (dnaE)
DNA replication proteins [BR:
ssaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPR59_08210 (dnaE)
DNA repair and recombination proteins [BR:
ssaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPR59_08210 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
Motif
Other DBs
NCBI-ProteinID:
WNO52463
UniProt:
A0ABZ0B6F8
LinkDB
All DBs
Position
1773902..1777444
Genome browser
AA seq
1180 aa
AA seq
DB search
MAHAGFVPLRIFSSYTMLDGAIEPSAIARHARELGFPAAALVDRNGLYAAMAFSDAAFDS
GVQPIIGTMLTVARPESPSGELSQPLDWLALLAQDEAGYANLCTLVSRGHLDRPIEEPAH
INFDALHGCTDGLIALTAGREGALARMFADGQSEAALRYADRLQDLFGDRLYVELSRRND
DVETRAEPHLLDLAYDRGLPIVATNPCCFAERDFHDAHDAMLCIANSSYVASDDRPKSSP
DAWLKPASEMKLLFADLPEAIDNSLVVAQRCAVAAPKRKPILPSLAGDREGEAARLREDA
RAGLVARLTKLISIDAAPDEGQPAEMAGTNAAALEARFPEYFERLEFELDIIIQMGFPGY
FLIVADFIKWAKDHDIPVGPGRGSGAGSVVAWALTITDLDPMKLGLLFERFLNPERVSMP
DFDIDFCETRRGEVIRYVQEKYGRDHVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLA
KLVPNLPADPWTLERALNGVSELHAEYRNDEGVRYLLDLAMKLEGLPRHSSTHAAGVVIG
DRPLSELVPLYRDPRSDMPVTQFDMKYVEGAGLVKFDFLGLKTLSVLNLATKLLKQRGIA
VDLDALKWDDEATYELLQRGETVGVFQLESEGMRRTLAAVRPSNFGDIIALVSLYRPGPM
DNIPMFGARKNGREPIEYPHPLLEPILEETYGIFVYQEQVMQAAQVLAGYSLGGADLLRR
AMGKKKKEEMDKQRAIFVAGCREHNGIEEAKANELFDLIDKFAGYGFNKSHAAAYALLAY
QTAWLKAHHPHEFFAASMSYDLHQTDKLAIFVDDMKRLGVSCLAPDINASEAEFTVEADA
DGALAVRYALAALKGVGERAMELLVDARRNEGRFRSLDDFARRVDPRLLNKRQLETLAGA
GAFDSIDDNRAGVHAVAETLLAVAARTHEQRVSGQGGLFGEGSAAEPDIKLPAAAHWSLV
QRIAAEKDAFGFYFSAHPLDRYAHLARTHQARTLASINEFEVPEGGRASALFAVLVEDAR
WRTSARGKRYLMAGLSDATAQCIATCFDDAVSEQVEEAAKAGGCGLVTAELDRRPGEETP
RVTIRQIQPFEQLANSARLILEFAVDGPAVLPLLAEMLADQRGGKAEVRLHATIAGGETE
LILGSDFLLDGELAERIESLQGVEWSVLKPAEIKRLAAAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgctggtttcgttcccttaagaatattctcctcctacaccatgctcgacggt
gcgatcgaaccgtcggcaatcgcccgccatgcgcgcgagctgggctttccggccgccgcg
ctcgtcgatcgcaacggcctgtacgccgccatggccttttccgatgccgccttcgattcg
ggcgtgcagccgatcatcgggacgatgttgaccgtcgcgcgtcccgaatcgccgtcggga
gaactgagccagccgctcgactggctggcgctgctggcccaggatgaggccgggtatgcc
aatctgtgcaccctggtgagccggggccatctcgatcgcccgatcgaagagccggcgcat
atcaatttcgatgccctgcacggatgcaccgatggcctgatcgcgcttaccgcggggcgg
gaaggggcgctcgcccggatgttcgccgacgggcaaagcgaagcggcgctacgctatgcc
gatcggctgcaggacctgttcggcgacaggctgtacgtcgaattgtcgcgccgcaacgac
gatgtcgagacgcgcgccgagcctcatctgctcgacctggcctatgatcgcggactgccg
atcgtcgcgaccaacccgtgctgctttgccgaacgcgatttccacgatgcgcatgatgcg
atgctctgcatcgccaattccagttatgtcgcgagcgacgatcggccgaagagttctccc
gacgcgtggctgaagccggccagcgagatgaaattgctgttcgccgatctgccggaggcg
atcgacaacagcctggtcgtcgcgcagcgctgcgccgtcgccgcgccgaagcggaaaccg
atcctgccaagccttgccggcgaccgggagggcgaggcggcgcgcttgcgcgaagatgcg
cgggccggcctggtcgcacgcctgacgaagttgatctcgatcgacgccgcgcctgacgag
ggtcagccggcggagatggccggcacgaacgccgcagctttggaagcgcggtttccagaa
tatttcgagaggctggagttcgaactcgacatcatcatccagatggggtttccgggctat
ttcctgatcgtcgccgacttcatcaaatgggccaaggatcacgacatcccggtggggccg
ggccgcggttccggcgccggctcggtcgtcgcctgggcgctcactatcaccgatctcgac
ccgatgaagctgggcctgctgttcgagcgctttctcaaccccgaacgcgtatcgatgccg
gacttcgacatcgatttctgcgaaacgcggcgcggcgaggtgatccgctatgtccaagag
aaatacggccgggatcatgtcgcgcagatcataaccttcggtaagctgaaggcgcgagcg
gtgctgaaggacaccggccgcgtgctgcagatgagctatggtcaggtcgaccggctcgcc
aagcttgtgccgaacctgccggccgatccctggacgctggaacgtgccctgaacggcgtc
agcgaacttcatgcggagtatcggaacgacgagggcgttcgctaccttctcgatctcgcg
atgaagctggaaggcttgccacgccacagttccacccatgccgcgggtgtggtgatcggc
gaccgtccgctgtcggaactggtgcccctttatcgcgacccgcgctcggacatgccggtc
acgcagttcgacatgaaatatgtcgagggcgcggggctggtgaagttcgactttctgggg
ctgaagacgctttcggtgctcaatcttgcaacgaagctcctgaagcagcgcggtatcgcg
gtcgatctcgacgcgctcaaatgggacgacgaggcgacctacgagttgttgcagcgcggt
gagacggtcggggtcttccagcttgaatccgaaggcatgcggcgcacgcttgccgcggtc
cggccgtccaacttcggtgacatcattgcgctcgtgtcgctctatcgccccggaccgatg
gacaatatccccatgttcggcgcgcgcaagaacggccgtgaaccgatcgaatatccgcat
ccgctgctggagcctatcctggaggagacctacgggatcttcgtctatcaggagcaggtg
atgcaggcggcgcaggttcttgccggctattcgctcggcggcgcggacctgctgcgccgc
gccatgggcaagaagaagaaggaagagatggacaagcagcgcgcgatcttcgtcgcgggc
tgcagggagcataacggtatcgaagaggcgaaggccaacgagctgttcgacttgatcgac
aagttcgccggatacggtttcaacaagagccacgccgccgcctatgcgctgctcgcctat
cagaccgcctggctgaaggcgcatcacccgcacgaattcttcgcagcgtcgatgagctat
gacctgcaccagacggataagcttgcgatttttgtcgacgacatgaaaaggctgggcgtc
tcctgcctggcgcccgacatcaacgccagcgaagccgagttcacggtggaggcggacgcg
gatggcgctctggccgtccgctatgccctggccgcgctgaagggcgtgggcgagcgcgcc
atggaactgctggtcgatgcgcggcggaacgaggggcggttccggtcgctcgacgatttc
gcccgccgcgtcgatccccgtctcctcaacaaacggcagttggaaacgcttgccggcgcg
ggggctttcgattcgatcgacgacaatcgcgccggcgtccatgccgtggccgaaacgctg
ctggcggtcgcggcgcgcacgcacgagcagcgggtcagcggtcagggcggcctgttcggc
gaggggagcgcggccgagcccgacatcaagcttcccgccgctgcgcattggtcgctggtg
cagcgcatcgcggcggaaaaggatgcattcggcttttacttttccgcccatccgctcgat
cgctatgcgcatctggcgcgcacccatcaggcccgaaccctggcgagcatcaacgagttc
gaggtgccggagggcggccgggcaagtgcgttgttcgctgttctggtggaggatgcccgg
tggcgcacgtccgcgcgtggcaagcgttacctgatggccgggctttcggacgcgacggcg
cagtgcatcgcgacctgtttcgacgacgccgtgtccgagcaggtcgaagaggcggcgaag
gccggcggatgcggactggtgacggcggagctggatcgacggcccggtgaggagacgccg
cgcgtgaccatccggcagatccagccattcgagcaactagccaacagcgcgcgactgatc
ctggaattcgccgtcgacggtcccgcggtgttgccgttgctggcggagatgctcgccgat
cagcgcggcgggaaagcggaggtccggctgcacgccaccatcgcgggcggagagaccgaa
ctgatcctcggcagcgatttcctgctagatggggagcttgccgagcggatcgagagtctc
caaggtgtcgaatggtcggtattgaagccggcggagataaagcggcttgcggccgcagga
taa
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