Stakelama saccharophila: RPR59_08245
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Entry
RPR59_08245 CDS
T10187
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPR59_08245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssaa03400
]
RPR59_08245
Enzymes [BR:
ssaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RPR59_08245
DNA repair and recombination proteins [BR:
ssaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RPR59_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WNO52469
LinkDB
All DBs
Position
complement(1785649..1786527)
Genome browser
AA seq
292 aa
AA seq
DB search
MDSRSLIFRLLPALIRRLSSRIGNDLSKARWLQIDRRVNPGFYGLMGADQLQDWRRAAAS
TLEWWRDAGVDTLVDDAARDWLAPSEAVAAVAPPPASAAAGAPAPPADALPESLDAFLAW
RTGGDAPEAVWNTPMVPPAGPAEAELMVLVDMPEPGDADNGVLVGGASGALLDRMLAAIG
LSRGAVHIAGVALARPITGRIPPDHEARLGEIARHHVSLAAPRRLLMLGDAAARAIFGSD
GGLRRGRLDSVSHSGRSLPAVASFHPRFLLERPVAKAESWKDLQLLIGGNRL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcgttcactcatcttccgtctccttccggcgttgatccgccgcctctcgtcg
cgcataggcaacgacttgtccaaagcgcgatggctgcagattgaccgccgcgtcaacccg
ggattctatgggcttatgggggcggatcaacttcaggattggcgacgggccgccgcgagc
acactggaatggtggcgcgatgccggtgtggacacgctggtggacgacgccgcgcgcgac
tggctcgcaccttcggaagcggtagcggccgtcgcgcccccgccggcaagcgccgccgcc
ggtgcgcccgccccgcccgccgacgcgcttcccgagagcctggacgcatttctcgcctgg
cggacgggaggcgacgcgccggaggcggtctggaatacgcccatggtgccccccgccggc
ccggccgaggccgaactcatggtcctcgtggacatgccggagccgggcgatgccgacaac
ggtgtgctcgtgggtggtgccagtggcgcactgctcgatcgaatgctcgcggccatcggc
ctttctcgtggggccgtgcatattgccggcgtggcgctcgcccggccgataaccggacgc
attccgccagaccacgaggcgcggctcggcgaaattgcgcgccatcacgtctcgttggcg
gcgcccaggcggctgctcatgctgggggatgcggcggcacgcgcgatcttcgggagcgat
ggcggtctgcggcgcggacgtttggactccgttagtcattccggcaggagcttgccggcg
gtcgccagttttcatccgcgattccttcttgaacgccccgtcgccaaggcggaaagctgg
aaagacctgcaattgcttatcgggggcaaccgcttgtga
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integrated database retrieval system
