Stakelama saccharophila: RPR59_08835
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Entry
RPR59_08835 CDS
T10187
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssaa Stakelama saccharophila
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssaa03009
]
RPR59_08835 (rimO)
Enzymes [BR:
ssaa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RPR59_08835 (rimO)
Ribosome biogenesis [BR:
ssaa03009
]
Prokaryotic type
ribosomal protein modification factors
RPR59_08835 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WNO52577
LinkDB
All DBs
Position
1903512..1904840
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AA seq
442 aa
AA seq
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MATKLPEPPKVGMVSLGCPKNLVDSERILTKLRSDGYQLSGDYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVVVTGCMGKEAETIRSRFPDVLAITGAHQYEEVVGAVHTAAPM
PPSAYLNLVPDSGLKLTPRHYSYLKISEGCNHRCAFCIIPALRGDLVSRRPDAILREAEK
LVEAGTKELLVISQDTSAYGIDIRKQPRAWHGREVVPHMTDLARELGRIAPWVRLHYVYP
YPHVDQVIPLMAEGLITPYLDIPFQHASRSVLRAMKRPANEARVLERIKGWRAICPDLAI
RSTFVVGFPGETESDFDYLMDWLDEAQLDRVGAFRFEPVEGAAANDLPGAVPEEIKEERY
ARLMEKTATISAAKLQAKIGRTLDVIIDEVGGDGATGRSQADAPEIDGSVFLRDAGHLTQ
GDIVAVEIEDADEHDLYGAPLG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaacttcctgaaccgcccaaggtgggcatggtgtcgctcggctgtcccaag
aatctggtcgactccgaacgcatcctcaccaagctgcgcagcgacggctatcagctttcg
ggcgattatgccggcgcggacgtcgtcctcgtcaacacctgtggctttctcgacagcgcc
aaggaagaaagcctcgaggcgatcggcgaggccatcgccgagaacggccgcgtcgtcgtt
accggctgcatgggcaaggaagccgaaacgatccgctcgcgcttccccgacgttctcgcc
atcaccggcgcgcatcagtatgaggaggtcgtcggcgccgtccataccgccgcgccgatg
ccgcccagcgcctatctgaacctcgtgcccgacagcgggctgaagctcaccccgcgccat
tacagctatctgaagatttcggagggctgcaaccaccgctgtgccttctgcatcatcccg
gcgcttcgtggagatctcgtcagccgccgccccgatgcgatcctgcgcgaggcggaaaag
ctggtcgaagcgggcacgaaggaattgctggtcatcagccaggacacctcggcctatggc
atcgacatccgcaagcagccgcgcgcatggcacggccgcgaggtcgtgccgcacatgacc
gatctcgcccgcgaactcggccgcatcgcgccgtgggtacggctgcattacgtctatccc
tatccccatgtcgatcaggtcatcccgctgatggccgaggggctgatcaccccctatctc
gatatcccgttccagcatgccagccgcagcgtgctgagggcgatgaagcgcccggccaac
gaggccagggtgctcgaacgcatcaagggctggcgcgcaatctgccccgatctcgccatc
cgctcgaccttcgtcgtcggctttcccggcgagacggaatcggatttcgactatctgatg
gactggctcgacgaagcgcagctcgaccgcgtcggcgcgttccgtttcgaacccgtggag
ggcgccgccgccaacgacctgcccggcgcggtgcccgaggagattaaggaagaacgctac
gcccgcctgatggagaagaccgcgacgatttcggcggccaaactccaggcgaagatcggc
cgcacgctcgacgtcatcatcgacgaagtcggcggcgacggcgcgaccgggcggtcacag
gccgatgcgcccgaaatcgacggctcggtgttcctgcgcgatgcgggccatctgacgcag
ggcgacatcgtcgcggtcgagatcgaggacgccgacgaacacgacctctacggcgccccg
ctcggataa
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