Stakelama saccharophila: RPR59_14110
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Entry
RPR59_14110 CDS
T10187
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ssaa Stakelama saccharophila
Pathway
ssaa00300
Lysine biosynthesis
ssaa00470
D-Amino acid metabolism
ssaa01100
Metabolic pathways
ssaa01110
Biosynthesis of secondary metabolites
ssaa01120
Microbial metabolism in diverse environments
ssaa01230
Biosynthesis of amino acids
Module
ssaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ssaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPR59_14110 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPR59_14110 (dapF)
Enzymes [BR:
ssaa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RPR59_14110 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WNO53554
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All DBs
Position
complement(3014980..3015927)
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AA seq
315 aa
AA seq
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MRLAFIKCHGSGNDFPLVDAREIALDDAGWARVARALANRDGPVGGDGLLLLTPGGDGHA
FGMRMFNPDGSEAETCLNGLRCTARLGFETTGLNAAQVRLKTSSAQAAMAEPIAPGVTSI
TTRAGPVTTDPGAVGLVGLAEAVIDAAIAGLPSERAFTALAIANPHLVAFVETVDEAELV
ALGDWCEAKPALIPNRINVSFASAGSGGLFVRTYERGVGLTNSCGSAMAAATFAAGLTGR
IAFGREIVVRNRGGLVRARAEAPAAGGMVSVTGNATFLYDGVITVDPDSGAIDDLAVHSR
RPDEVAAWAAVAGGA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgccttcatcaagtgccacggatcgggcaacgactttcccctggtcgatgcg
cgcgaaatcgcgctcgacgatgcaggatgggcacgggtggcgcgggcgctggcgaatcgc
gacgggccggtgggcggcgacggattgttgctgctgacccccggcggggacgggcacgcc
ttcggcatgcggatgttcaatcccgacggcagcgaggccgagacgtgcctgaacggcctg
cgctgtaccgcgcggctggggttcgaaacgaccggcctgaacgccgcgcaggtgcggttg
aagaccagcagcgcacaggccgccatggccgagccgatcgcgccgggcgtgacgtcgatc
acgacgcgggcggggccggtgacgaccgatccgggggccgtgggcctggtcgggctggcg
gaggcggtgatcgacgccgcgatcgcgggcctgccgagcgagcgcgcctttaccgcgctc
gccatcgccaacccgcatctggtcgcctttgtcgagacggtggacgaggcggaactggtg
gcgctgggcgactggtgcgaggcgaagccggcgctgatcccgaaccggatcaatgtcagc
ttcgcgagcgcgggcagcggcggactgttcgtgcgaacctatgagcgcggggtcgggctg
accaacagttgcgggagcgcgatggcggcggcgacctttgccgcagggctgaccgggcgg
atcgccttcggccgcgaaatcgtggtgcgcaatcgcggcgggctggtgcgggcccgcgcc
gaggccccggcggcgggcggcatggtatcggtcaccggcaatgccaccttcctctatgac
ggcgtgatcacggtcgatcccgacagcggcgcgatcgacgaccttgccgtgcatagccgg
cgcccggacgaggtggccgcctgggcggcggtggcgggcggagcataa
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