| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
ssab Spiroplasma sabaudiense
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ssab00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSABA_v1c00420 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ssab03021]
SSABA_v1c00420 (rpoC)
03400 DNA repair and recombination proteins [BR:ssab03400]
SSABA_v1c00420 (rpoC)
Enzymes [BR:ssab01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSABA_v1c00420 (rpoC)
Transcription machinery [BR:ssab03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSABA_v1c00420 (rpoC)
DNA repair and recombination proteins [BR:ssab03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSABA_v1c00420 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
45291..49055
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| AA seq |
1254 aa
MVNSKNEKRMIKIDLASPDVIRSWSRGEVTKAETINYKTLKTERDGLFDERIFGPTKNYE
CACGKYKKVKNKGKVCERCLVEITESIVRRERMGHIELEEPVTHIWMLKVAPSRIAAILD
LKTKELEEVVYFVSHIVLEPGTSKYLKKGQVLDLGNTKISIKTREKLTKTLEDIKEDFDL
SDPKQEIGFRRAEKMIEELRNASIPFSMDEAASFIGKYTNAKFGIGASAIEELLKNINLD
EAIIKIKEELKEKRGSVEQNKMMKRLEVLDSLKKSNSRPEWMILHVIPVIPPDIRPIIQL
DGGRFTTSEINDLYRRIIIRNERLKKVKSMGAPSIIVNNEKRMLQEAVDALLDNERKARP
VTGKDKRALKSLTSILKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPRDMAII
LFKPFVIKWLQEHNHAENVKVAEKMIQSGDLKIWEALESVTKDRPVLLNRAPTLHRLGIQ
AFEPKLVKGKAIRLHPLVTTAFNADFDGDQMAVHLPISPEAVAEARVLMLGSKAILGPKD
GKPIVTPTQDMILGNYYVTFEEKGQKGEGMLFSNPAEAKIAYEAGVVSLNSIIALDVNSL
DKKHFSTDKSGYLITTVGKILFNEIFSENFPWLNNSNIFQAENEVDKFIVSDDTNISEYI
ANKYETQQPIKKKDLSEIIDRYFRTYGSQKTAQMLDNMKDLGFKYSSKSGTTISAGDVVA
YKNKYEDFKVADKKVAQITEFYNMGMLTFSEKKRRVINVWSAVKDEIQTQLESVLKQDPK
NPVFVMADSGARGNVSNFTQLVGMRGLMNDPKGDIKEIPIKSSFREGLTVSEYFISTHGA
RKGMADIALKTADSGYLTRRLVDVSQEIIITETDCEPSKGFEIGDVVETKHDNIIVPLRD
RLMGRYIFADVEDEKGNTIVRGDTLVDEEIANQIIEAGVKTVQIRSVLTCDSDKGICKKC
YGINLATGELVEIGEPVGVIAAQSIGEPGTQLTMRTFHTGGVAGGDDITQGLPRIKELLD
VTNPKGSVAIISQIDGVISEIIEEDGMFTVIVKSNNDERKYKSQYGAIIRVKVGEPVTRG
QKLTEGAINIKDLLEVARIEDVENYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVKII
DSGDTDLLPGEIVTVKNYKSVITKAIVEGKKPPLAKYTIFGIKKAPLESESWLSSASFQD
TARVLVKAIIKGKIDKLEGLKENIMLGNLIPAGTGLTGSAEIIKRGQESLANEY |
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| NT seq |
3765 nt +upstreamnt +downstreamnt
atggtaaattcaaaaaatgaaaaaagaatgataaaaattgacctagctagtcccgatgta
attcgttcttgatctcgaggagaagttacaaaagctgaaacaatcaactataaaacttta
aaaactgaacgcgatggtctttttgatgaaagaatatttggaccaacaaaaaactatgaa
tgtgcttgtggtaagtataaaaaagtcaaaaacaaaggtaaggtttgtgagcgttgtcta
gttgaaattacagagtcaatcgttcgtcgtgaacgaatggggcatattgaactagaggaa
ccagtaactcatatctgaatgttgaaggtggctccaagccgaatagcagcaattttagat
cttaaaacaaaagaacttgaggaagttgtctactttgtttcccatattgttttagaacca
ggaacctcaaaatatttaaaaaaaggtcaggttctagatttaggaaacactaaaataagt
ataaaaactcgtgaaaaattgacaaaaactctagaagatattaaagaagattttgattta
agcgatccaaaacaagaaattggttttcgccgcgctgaaaaaatgattgaagaattaaga
aatgcttcaattcctttttctatggacgaggcagcaagttttattggaaagtatacaaat
gccaaatttggaatcggagcaagcgccattgaagagttattaaagaatattaatttagat
gaagcaattattaaaatcaaagaagaattaaaagaaaagcgtggaagcgttgaacaaaat
aaaatgatgaaacgattggaagttctagattcactgaaaaagtcaaattcacgaccagaa
tgaatgattttacatgttattccagtaattcccccagacattcgtccaataattcaatta
gatggtggaagatttactacatctgaaattaatgacttgtaccgtcgtattattattaga
aatgaacgattaaaaaaagttaaatcaatgggagcaccaagcattattgtaaataacgaa
aaacgtatgcttcaagaagctgttgacgccctattggataacgaacgtaaagctcgccct
gtaacaggaaaagacaagcgtgctttaaaatcactaacatcaattttaaaaggtaaacaa
ggtcgtttccgtcagaatttacttggaaagcgtgttgattactctgggcgttcggttatc
gcaattgggcctgatttaaaaatgtatcaagcaggaattcctcgagatatggcaattatt
ttgtttaaaccatttgtaattaaatgactacaagaacacaaccatgctgaaaatgttaaa
gtggccgaaaaaatgatccaatcaggagacttaaaaatctgggaagcacttgaaagtgtt
acaaaagaccgaccagtgcttttaaaccgtgctccaactttacaccgtcttggaattcaa
gcctttgaaccaaaactggtaaagggaaaagctattcgtttacacccgttagtaacaaca
gcatttaatgctgactttgatggggatcaaatggcggtccacttaccaatatctccagaa
gcggtcgcagaagctcgtgtcttaatgcttggaagtaaagcgattttaggtccaaaagat
ggaaaacctattgttactccaacccaagatatgattttaggaaactactatgttacattt
gaagaaaaaggccaaaaaggtgaaggaatgctattttcaaaccctgcagaggctaaaatt
gcttatgaagcaggagtggtatctttaaactctattattgcattggatgtaaactctttg
gataagaaacacttttcaacagataaatccggttatttaataacaactgtaggaaagatt
ttatttaatgaaatcttctcagaaaatttcccttggctaaacaatagcaatatttttcaa
gctgagaatgaagttgataaatttattgtaagtgatgacactaacatttctgaatacatc
gccaacaaatatgaaactcaacaaccaattaagaaaaaggatttatcagaaattattgat
cgctactttagaacttatggttcacaaaagactgctcaaatgttagataatatgaaggat
ttaggatttaaatattcttcaaaatctggaacaacaatttctgcaggtgacgttgttgcc
tacaaaaataaatacgaagattttaaggttgcagataaaaaagttgctcaaattacagaa
ttttacaacatgggtatgttaacattttcagagaagaaacgccgagtgattaatgtttga
tcagctgttaaagatgagattcaaacgcaattggaatcggtattaaagcaagatccaaaa
aatccagtatttgtaatggcagattcaggagcaaggggtaatgtttccaactttactcag
cttgtaggtatgcgtggtcttatgaatgacccgaaaggtgatattaaagaaattccaatt
aagtcatcgttccgtgaaggtctaacagtttcagaatactttatttcaactcatggggct
cgtaaagggatggcggatatcgccttaaaaactgccgattcagggtatttaactcgtaga
cttgttgatgtatctcaagagattattattacagaaacagactgtgaaccatcaaaaggg
tttgaaatcggagatgttgttgaaacaaaacatgataacatcattgttccgctgcgagac
cgtttaatgggacgctatatatttgctgatgttgaagatgaaaaaggaaataccatagtt
cgtggtgatactttagtagatgaagaaatagcaaatcaaattatcgaagccggggtaaaa
accgttcaaattcgttcggtattaacttgtgatagtgataagggaatatgtaaaaaatgt
tatggaattaatctagcaacaggagagcttgttgaaattggtgaacctgtcggagttatt
gctgcccagtcaattggtgagccaggaactcagttaacaatgcgtaccttccataccgga
ggggttgccgggggagatgatatcactcaaggtcttccacgtattaaagaacttcttgac
gtaacaaacccaaaaggaagtgttgcgattatttctcaaattgacggagtaatctcagag
attatcgaagaagatggaatgtttactgtcattgtaaaatcaaacaatgatgaaagaaaa
tacaagtcacaatacggagcaattatccgtgttaaagttggcgaacctgtgactcgtggt
cagaaattaactgagggtgcgattaatatcaaagatttacttgaagttgcgcgtattgaa
gatgtagaaaactatattttaaaagaagtgcaaaaagtttaccgtttgcaaggaattgaa
atttcagataaatacatcgaaattattgtaaaacaaatgttaaataaagttaaaattatt
gattcaggtgacaccgatctgcttcccggggaaattgtaacagttaaaaattacaaatct
gttattaccaaagcgattgttgaaggcaaaaaaccaccgttagctaaatacacaattttc
ggtattaaaaaagctcctttggagtctgagtcatgactatcgtcagcctcgttccaagat
acagctagagttcttgtaaaagcaataatcaaaggtaaaattgataagcttgaaggactg
aaagaaaacattatgttaggaaacctaattcctgcgggaaccggactaacaggaagtgct
gaaattatcaaacgtggccaagaaagtttggcaaacgaatattaa |
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