Spiroplasma sabaudiense: SSABA_v1c02550
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Entry
SSABA_v1c02550 CDS
T03048
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
ssab
Spiroplasma sabaudiense
Brite
KEGG Orthology (KO) [BR:
ssab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssab03032
]
SSABA_v1c02550 (hupB)
03036 Chromosome and associated proteins [BR:
ssab03036
]
SSABA_v1c02550 (hupB)
03400 DNA repair and recombination proteins [BR:
ssab03400
]
SSABA_v1c02550 (hupB)
DNA replication proteins [BR:
ssab03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SSABA_v1c02550 (hupB)
Chromosome and associated proteins [BR:
ssab03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SSABA_v1c02550 (hupB)
DNA repair and recombination proteins [BR:
ssab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SSABA_v1c02550 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
YdfZ
Motif
Other DBs
NCBI-ProteinID:
AHI53667
UniProt:
W6A9G1
LinkDB
All DBs
Position
287224..287502
Genome browser
AA seq
92 aa
AA seq
DB search
MTKKELSEKLASNFDVQKSEADKMLGFIFDEVTNALTSGDEVSIAGFGKFSVADRAAREG
VNPSTGAKIQIAATKVAKFKVAKQLKDAVAQS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagaattatcggaaaaattagcaagtaattttgatgttcaaaaatcagaa
gcggataaaatgttgggattcatttttgatgaagttaccaacgcattaacaagcggagat
gaagtttcaattgctgggtttggtaaattttcagttgcagatagagcagctagagaaggg
gtaaacccatcaactggtgcaaaaattcaaatagctgcaacaaaggttgcaaagtttaaa
gttgcaaaacaactaaaagatgctgtagctcaaagctaa
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