Spiroplasma sabaudiense: SSABA_v1c04770
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Entry
SSABA_v1c04770 CDS
T03048
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ssab
Spiroplasma sabaudiense
Pathway
ssab03030
DNA replication
ssab03430
Mismatch repair
ssab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSABA_v1c04770 (holA)
03430 Mismatch repair
SSABA_v1c04770 (holA)
03440 Homologous recombination
SSABA_v1c04770 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssab03032
]
SSABA_v1c04770 (holA)
03400 DNA repair and recombination proteins [BR:
ssab03400
]
SSABA_v1c04770 (holA)
Enzymes [BR:
ssab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSABA_v1c04770 (holA)
DNA replication proteins [BR:
ssab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSABA_v1c04770 (holA)
DNA repair and recombination proteins [BR:
ssab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSABA_v1c04770 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AHI53884
UniProt:
W6AJI9
LinkDB
All DBs
Position
549871..550824
Genome browser
AA seq
317 aa
AA seq
DB search
MNLIIGTDAFLVEKELEKTTKIINKNKDFEIIRFNLIEEDFENIVNQANTFSLFSSQKLI
IIEECWFLTEKKVNLNKSFSVEKFQTFIENFPPENSLILTLNESKISKKLKIGKFVESKF
KIIEIPALNINTAYNFIEKKLNHEGILFDSKAIWEFLNIVPLDARVIRNEISKLIGLGKP
IDLNNVNSVLNEYYFYDIFKIVNSFLNEKIVDFMSDYYKYIQLNKDVLGFIYLIISSLIQ
VRNIIILKNKSYNFNHISERLGINMFRINKLLEIKVQNLDKINDKIKEMYVIISNILKGN
FDSKVIPELSFIKLMVG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaattattggaactgatgcttttttggtagaaaaagaattagaaaaaactacc
aagattattaataagaataaagattttgaaataattaggtttaatttgattgaagaggat
tttgaaaatattgtcaatcaagcaaatacctttagtttattttcttctcaaaagctaatt
attatagaggaatgctgattccttaccgaaaaaaaagtcaatttaaataaaagtttttca
gtggaaaaatttcaaacatttatcgaaaacttccccccagaaaactctttaattttaacc
ttaaacgaatctaaaattagtaaaaaattaaaaattggtaagtttgttgaaagcaaattt
aagataattgagatacctgccttaaatataaatactgcttataattttattgaaaaaaaa
ctaaatcatgaggggattttgtttgattctaaggctatttgggagtttttgaatattgtt
ccattagatgctagagttatcagaaatgagatttctaaacttataggactaggtaagcca
attgatttaaataatgttaattcagttctcaatgagtattatttttatgatatttttaaa
attgtaaattctttcttaaacgaaaaaattgtagattttatgtcagactattacaaatat
attcaattaaataaagatgtgcttggttttatctatttgataataagctcactaatacaa
gttagaaatattataattttaaaaaataaatcatataattttaaccatatcagcgagaga
ctagggattaatatgtttagaataaataaattacttgaaataaaagttcagaatttagac
aaaattaatgataaaattaaggaaatgtatgtaattatttcaaacattttaaaaggtaat
tttgatagtaaagttataccagaattatcttttataaaattaatggtagggtag
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